Camelina sativa (false flax): 104739453
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Entry
104739453 CDS
T05044
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csat03000
]
104739453
03036 Chromosome and associated proteins [BR:
csat03036
]
104739453
Transcription factors [BR:
csat03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
104739453
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
104739453
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
104739453
NCBI-ProteinID:
XP_010458103
LinkDB
All DBs
Position
14:3693116..3704494
Genome browser
AA seq
1469 aa
AA seq
DB search
MEPNEGKGKDQGEKPEEKVYTVEATEDVMDITDEIMEVDQEMMEAKLEEVMKARDERGEH
IDVQMEENNNQDGQKDEDMQATESISESSEFSSEEDEQLLLGRDDDLDHEKPLSEEEIEE
LISDFLGVESKAADAQEALEKESLSNVESEVRKELSQTLSGEELNKAVAAEMMTFKDEWE
ATLDELETESANLLEQLDGAGIELPKLYEMIESQAPNGCHTEAWKQRAHWVGTQVTKETV
ESLANAERFLHTHRPVRKRHGKLLEEGASGFLEKKLADGAAKESLAGTSELDWSSLNKVF
SEKRDESISFGSKDWASVYLASTPQQAAAMGLEFPGVNEVEEIEEIDAGLADPFLADAIE
NERELPLSEEQKKNYIRVKEEDDLNSDRELQLRLKRKRRSKRSKQVIRCTAENMDDDCVY
LNGNYIAQSSGEDRVKIPETSTQVHNNEVNRVENGKLSNSDVDTMRDDSHNPANSFRCTA
CNNVAVEVHTHPLLEVIVCMDCKRSIEDRVAKIEDSSERSCEWCGHITDLIDCRTCEKLF
CASCIKRNIGEEYLSEAQSSGWDCCCCSPMPLQRLTLELEKAIRDKKSVELSSDSSSDSS
SDSSSDNNSADVNVAISLKKKSKKRIRRIIDDAELGKDTRRKIAIEKERQERLRSLQFSA
RYKTISSMGDLKSIPEGAEVEVLGDAHSGYIVNVAREIGEGAVRVPCSISAKLKVHQVTG
IRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRCVDLGLKTALIVT
PVNVLHNWRSEFMKWMPSEVKPLRIFMLEDVSRERRLDLLKKWRNKGGVFLMGYAAFRNL
SLGRGVKDLNAAREICSALRDGPDILVCDEAHIIKNTRADTTQALKQVKCQRRIALTGSP
LQNNLMEYYCMVDFVREGFLGSSPEFRNRFQNPIENGQHMNSTAEDVKIMNQRSHILYEQ
LKGFVQRMDMNVVKKDLPPKTVFVISVKLSPLQRKLYQRFLRLYGFSDGRADERMRKNFF
AAYQVLAQILNHPGIPQLRREDSKNGRRGSIVDIPDDCSSEENTDYNMVTGEKQRTMNDL
QDKVDGYLQKDWWVDLLQKNNYKVAEYSGKMILLLDILSMCADVGDKALVFSQSIPTLDL
IELYLSRVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLVDRFNEPDNKRVKCTLISTRA
GSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAYRLMARGTIEEKIYKRQ
VTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKSDTVTEISKQNEVAQCNLVENSQ
KQKATLPRVGCDKLMESLLQRHGPNWISNFHEHETLLQENEEERLTKEEKDMAWEVYRRA
LEWEEVQRVPLSESPVLPKPSPSVQTEPVRMPKLFNRSRFVIRNCTRTAHQLTLISQGIR
VGNSTFCGECGRVLTWADVLPAAKPSEVN
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atggagccaaatgaaggaaaagggaaggatcaaggtgaaaagccagaggagaaggtgtat
acagtggaggcaacagaggatgtgatggatataacagacgaaataatggaggtagaccag
gagatgatggaggcaaagcttgaagaggtgatgaaagctagagatgagagaggggagcac
attgatgtgcagatggaagaaaataacaatcaggatgggcaaaaagatgaggatatgcaa
gccactgagagtatatcggaaagttctgaattcagttcagaagaagatgaacaattgctg
ttgggacgagatgatgacttggatcatgagaaacctctgagcgaggaagaaatagaagag
ttaatttcagattttttgggagttgagagtaaggctgcagatgctcaagaagcacttgaa
aaggagtctctttctaatgtagagagtgaagttaggaaggaattatcacaaacactcagt
ggtgaagagttgaataaagctgttgctgctgaaatgatgacttttaaagatgaatgggag
gcaactcttgatgagcttgaaacagaaagcgcaaacctgttggagcaacttgatggtgca
ggaattgagcttccaaaattatatgagatgatagaaagtcaagcccctaatggttgccac
actgaagcttggaaacaaagagcccactgggttgggactcaggtgacaaaagaaactgtg
gaatcattggctaacgctgagaggtttcttcacactcaccggcctgtccgaaaacgacat
ggaaaacttttggaggagggagctagtggttttctggagaaaaagcttgctgatggtgct
gccaaagaatctctagctggaacatctgaacttgactggtcgtctctaaacaaagttttt
tcggaaaaaagggatgagtctatttcctttggtagtaaggattgggcgtctgtttacttg
gcaagcactccacaacaagctgcagccatgggattagaatttccaggagtcaatgaggta
gaggaaattgaagagattgatgcaggcttggcagatccatttttggccgatgcaatagaa
aatgaaagagaacttcccctttctgaagaacaaaagaaaaattatataagggtcaaagaa
gaggatgatttaaatagtgatcgtgaacttcaacttcgtttgaaacggaagagacgcagt
aaaagatctaaacaggttatcaggtgtacggcagagaatatggatgatgactgtgtgtat
ttgaatgggaattatattgcccaaagttctggtgaagatcgagtaaaaattcctgagacc
agcactcaagttcataacaatgaagtcaacagagtggaaaacgggaaattgtctaattca
gatgttgataccatgagagatgattcacataatccagcaaacagttttaggtgtactgcc
tgtaataacgtagctgtggaagtgcatactcacccccttttggaagtaatagtttgcatg
gattgtaaacgttcaattgaagatagagttgcgaagattgaagactcttcggaacgtagt
tgtgaatggtgtggtcatattactgacttaatagattgtaggacatgcgaaaaacttttc
tgtgcctcatgtataaagaggaatatcggtgaagaatacttgtctgaagctcagtcctct
ggttgggattgttgttgctgctctccaatgcccttgcaaagattgacactagaactggag
aaagccattagggataagaagtcagtagagttgagttctgattccagctctgattctagc
tctgattccagctctgataacaattcggctgatgttaatgtagcaatcagcttaaagaag
aaatcaaaaaagagaattcggcggataattgatgatgctgaactagggaaagatacgaga
agaaaaattgcaattgaaaaggaacggcaggagcgtcttaggtccttgcagttttctgcc
agatacaaaacaattagctctatgggagacctgaaatctattcctgaaggtgcggaagtt
gaggttcttggtgatgctcacagtggttacatagtgaatgtggctagggagattggtgaa
ggagctgtgagggttccttgtagcatatctgccaaactaaaagtccatcaggtaaccggg
attagatttatgtgggaaaatattattcagtctatcagcagagtaaagtcaggtgataaa
ggccttggctgcattctagctcatacaatgggcctgggcaaaacttttcaggttatagcg
ttcctgtacaccgcaatgagatgtgttgatttggggttgaaaactgctcttattgtgact
cctgtaaatgtgttgcacaattggcgaagtgaattcatgaagtggatgccatcagaagta
aaaccacttcgcattttcatgcttgaagatgtttcaagggagaggagattggacttgcta
aaaaagtggcgaaataaggggggagttttcttgatgggatatgcagcttttagaaacctg
tctcttgggaggggggtgaaggatttgaatgcggccagagagatctgtagtgccttgagg
gatggacctgatatacttgtttgcgatgaggctcacattattaagaacaccagggctgac
acaacgcaagctttgaagcaagttaaatgccagagaagaattgccttaactgggtcaccc
cttcaaaacaatctcatggaatattattgtatggttgattttgtcagagaaggattcttg
gggagtagtcctgagtttagaaatcggttccaaaatccaatagaaaacggacagcatatg
aattctactgcggaggatgtaaaaattatgaaccagagatcacacattctgtatgagcaa
ttgaaaggatttgtgcaaagaatggacatgaatgtggtgaaaaaggatctgccacctaaa
acagtcttcgtaatatctgtcaagctatcgcccttgcagcggaaattgtatcagagattt
cttaggttatatgggttcagcgatggaagagcagatgaaagaatgagaaaaaactttttc
gctgcttaccaggtcttggctcagattttaaatcatccagggattccgcaattaagaaga
gaggatagcaagaatggtcgtcgtggtagcattgttgatattccagatgactgctcaagt
gaagaaaatacagactacaacatggttacgggagagaaacaaagaactatgaatgatttg
caagataaagttgatggctacctccagaaggattggtgggtcgacctacttcaaaaaaat
aattataaggtggcggagtatagcggcaaaatgattttgctattggatattttatccatg
tgtgctgatgtgggggataaggcgcttgtgtttagccagagtatcccgacactggatctc
atagaactatatctttcaagagtacctcggcatggaaaacaaggaaagttctggaaaaag
ggaaaagactggtacagaattgatggaaaaactgaaagctcagaacggcagaagttggtt
gataggtttaatgagcctgataacaaaagggtgaaatgcactctaatttcaaccagagcg
ggatcgcttggaattaatctttatgctgctaaccgtgtgatcatagttgatggttcatgg
aatccaacctatgatcttcaagctatatttcgagcatggaggtatggtcaaaagaaacca
gtatttgcatacaggttgatggcacgtgggactattgaagaaaagatatataaacgtcag
gtgaccaaggaggggctagctgcgagagtggtggatagacaacaagtgcacaggactatc
tccaaagaagagatgttacacctttttgaatttgacgacgatgatgagaaatctgacacc
gtaactgagataagcaagcaaaatgaagtggctcaatgcaatctggtggagaattcacag
aaacagaaggccactttacctcgtgttggctgtgacaaattgatggagagcttgctacag
agacacgggccaaactggatttccaatttccatgagcacgagacattgttacaagagaat
gaggaggaaagactgacaaaggaggaaaaagacatggcctgggaagtttacaggagggcg
cttgaatgggaagaagttcagcgggtaccacttagcgaatctccagtgctcccaaaacct
tctccttctgtacaaacagaacccgtacgcatgccaaagttgttcaacagaagtcgtttt
gtgattcgtaactgcaccagaactgctcaccagcttactctcataagccaaggaataaga
gtggggaatagcacgttctgtggggagtgtgggcgcgtgttaacatgggcagacgtttta
cctgcagctaaaccttcagaggtaaactaa
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