Camelina sativa (false flax): 104739501
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Entry
104739501 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor SR30
KO
K12890
serine/arginine-rich splicing factor 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104739501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104739501
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104739501
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104739501
NCBI-ProteinID:
XP_010458181
LinkDB
All DBs
Position
14:complement(3975566..3978805)
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AA seq
261 aa
AA seq
DB search
MSSRWNRTIYVGNLPGDIRMRELEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYDFAGCRLRVEIAHGGRRGSSSVDRYSSSYSGSRAPSRRSDFRVLVTGLPPSA
SWQDLKDHMRKAGDVCFSEVFRDRGGMSGVVDYSNYDDMKYALRKLDDSEFRNAFSKAYI
RVREYESRSVSRSPDYSRSRSRSRGRSYSYSSRSRSVSPARSVTPRSRSLTRSRSPHSSV
SRSPSKSRSRSNSPVSPVRSD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccgatggaatcgtacgatctacgttgggaatctccctggagatattcgcatg
cgtgagcttgaagatctcttttacaagtacggaccaattgtggacattgacttgaagatt
ccaccgagaccccctggttatgcctttgtcgagttcgaagatcctcgtgatgcagacgat
gctatctatggccgtgatggatatgactttgctggctgtcgacttagagttgagattgca
catggtggtcgtagaggttcatcatcagttgataggtacagcagcagctacagtggcagc
cgtgcaccttcaagacgctccgactttcgtgtgcttgtgactggattaccgccatctgct
tcgtggcaggacctgaaggatcacatgcgcaaagctggagatgtctgcttttctgaagtt
tttcgtgaccgtggaggcatgtctggggttgttgattatagcaactatgatgatatgaag
tacgcgttaaggaagctcgatgactctgaatttcgaaatgctttttctaaagcttacata
cgggtgagagaatatgagtcgaggagtgtgagtcgcagcccggattattccagaagcagg
agtcggagccgtggtcgaagctatagctatagtagcaggagcaggagtgtgtcacctgct
agatccgttaccccgcggtcacggtcccttactcgctctcgttcgccacatagctctgtt
tctaggtcgccatcaaaatcaagatcaagatccaattctcctgtttcacccgtgagatct
gattga
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