Camelina sativa (false flax): 104739550
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Entry
104739550 CDS
T05044
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
csat
Camelina sativa (false flax)
Pathway
csat04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
104739550
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Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
PAS_9
HATPase_c
PAS_4
HisKA
PAS_8
PAS_3
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
104739550
NCBI-ProteinID:
XP_010458244
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Position
14:complement(4128557..4134083)
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AA seq
1122 aa
AA seq
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MSGSRPSQSSEGSRRSRHSARIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQP
PRSDKVTTTYLHHIQKGKLIQPFGCLLALDEKTFKVIAYSENAPELLTMTSHAVPSVGEH
PVLGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCKTSAKPFYAIVHRVTGSIIV
DFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMAQEVFELTGYDRVM
AYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARV
LQDEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDSTAQPQ
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELENQIVEKNILRTQTLL
CDMLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKVWKLGTTPSEFHLQEIASWLCEYHT
DSTGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPD
DRDDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDGETTDVNTKVI
HSKLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEA
IGKHLLTLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTQLTRADACPISLVVNACASRD
LHENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNP
AMSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFA
FFTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKAL
AYIKRQIRNPLSGIMFARKMIEGTELGPEQRQILQTSALCQKQLSKILDDSDLESIIEGC
LDLEMKEFSLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFM
LMSVNFTPSGGQLTVTASLRKDQLGRSVHLASLEIRLTHTGAGIPEFLLNQMFGTEEDVS
EEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIISAELAAANK
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggtctaggccaagtcagtcctctgagggctctaggcgatcaaggcacagcgct
agaatcattgcgcagaccactgtagatgcgaagctccatgctgattttgaggagtcaggc
agttcctttgattactcaacctcagttcgtgtcactggcccggttgtggagaaccagcca
ccaaggtctgacaaggtgaccacgacttatcttcatcacatacagaagggaaagctgatt
cagccctttggttgtttgcttgccttggatgagaagactttcaaagtcattgcatacagc
gagaatgctcccgagttgttgacaatgaccagtcatgcagttcctagtgttggcgagcac
cctgttctaggcattgggacagatataaggagtcttttcacagctcctagtgcctctgca
ttgcagaaagctcttggatttggagatgtatccttgttgaatcccattcttgtgcactgc
aagacttctgcaaaacccttttatgcgattgtccacagggttacagggagcatcattgtc
gactttgaaccggtaaagccttatgaagttcccatgacagctgctggtgccttacaatca
tataagctcgctgccaaagcaatcactaggctgcaatctttgcccagtggaagcatggaa
aggctttgtgatacaatggcacaggaggtttttgaactcacggggtatgacagggtgatg
gcttataaatttcatgaagatgatcacggtgaggttgtctccgaggttacaaaacctggg
ctggaaccttatcttggtctgcattatccagccactgacatccctcaggcagcccgtttt
ctgtttatgaagaacaaggtccggatgatcgttgattgcaatgcaaaacatgctagggtg
cttcaagatgaaaagctttcctttgatcttaccttgtgtggctctaccctcagagcaccg
cacagctgccatttacagtacatggccaacatggattcaattgcatctctggttatggcg
gttgtagttaatgaggaagatggagaaggggatgctcctgattctactgcacagcctcag
aagagaaagagattatggggtttagtggtttgtcataatacaactccaaggtttgtccca
tttcctctcaggtatgcatgtgagtttcttgctcaagtgtttgccatacacgtcaataag
gaggtggaactggagaaccagattgtggagaagaacattttgcgcacacagacactcttg
tgtgatatgctgatgcgtgatgctccactgggtattgtgtcgcagagccccaacataatg
gaccttgtgaaatgtgatggagcagcactcttgtataaagacaaggtatggaaactggga
acaactccaagtgagttccatctgcaggagatagcttcatggttgtgtgaataccacacg
gattcaacaggtttgagcactgatagtttgcatgacgctgggtttccgagggctctgtct
cttggggactcggtatgtggaatggcggctgtaaggatatcatcgaaagacatgattttc
tggttccgttctcataccgctggtgaagtgagatggggaggtgccaagcatgatccagat
gatagggatgatgcaaggagaatgcacccgaggtcatcgttcaaggctttccttgaagtg
gtcaagacaaggagtttaccttggaaggactatgagatggatgcaatacactccttgcag
cttattctgaggaatgctttcaaggatggtgagactactgatgtgaatacaaaggtcatt
cactctaagctaaatgatctcaaaattgatggtatacaagaactagaagctgtgaccagt
gagatggttcgtttaattgagactgctacggtgccaatattggcggttgattctgatgga
ttggttaatggctggaacacgaaaattgctgagctgactggtctttcggttgatgaagca
attgggaagcatctcctcacacttgttgaagattcttcggtggaaatcgttaaaaggatg
ctagagaatgcattagaaggaaccgaggagcagaatgtccaatttgaaatcaagacacaa
ctgaccagagctgatgcttgtccaataagtttagttgtaaatgcatgtgcaagtagagat
cttcatgaaaacgttgttggggtgtgttttgtagcccatgatcttactggccagaagact
gtgatggacaagtttactcggattgaaggtgattacaaggcgattatccaaaatccaaac
ccgctgatcccgcccatatttggcaccgatgagtttggatggtgcacagagtggaatcca
gcaatgtcaaagttaaccggtttaaagcgagaggaagtgatcgacaagatgctcttagga
gaagtctttgggacacagaaatcatgttgtcgtctaaagaatcaagaagcttttgtaaac
cttgggattgtgctgaacaacgctgtgaccagtcaagatccagagaaagtgtcctttgct
ttctttacaagaggtggcaagtatgtagagtgtctgttgtgtgtgagtaagaaactggac
agggaaggtgtagtgacaggtgtattctgtttcctgcaacttgccagccatgagctgcag
caagcgctccatgttcagcgtctagctgagagaaccgcagtgaagagactaaaggctcta
gcatacatcaaaagacagatccggaatccgctttctgggattatgtttgcaaggaaaatg
atagaaggcactgaattaggaccagagcagagacagattttgcaaactagcgcgttatgt
cagaagcaactaagcaagatccttgatgattcggatcttgaaagcattatagaagggtgt
ttggatctggaaatgaaagagttcagcttaaacgaagtgttgactgcttccacaagtcaa
gtaatgatgaagagtaacggaaagagtgttcgaataacaaatgagaccggagaagaagta
atgtctgatactttgtatggagacagtattaggcttcaacaagtcttggcagatttcatg
ctgatgtctgttaactttacaccatccggaggtcagctaactgttacagcttccttgagg
aaggatcagcttgggcgttctgtgcatcttgcttctttagagatcaggttaacgcatacg
ggagctgggatacccgagtttttactaaaccaaatgtttgggactgaggaagatgtgtca
gaagaaggtttgagtttgatggttagccggaaactggtgaagctgatgaatggagatgtt
cagtacttgagacaagctgggaaatcaagtttcattatctctgcagaactcgctgcagca
aacaagtag
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