Camelina sativa (false flax): 104739588
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Entry
104739588 CDS
T05044
Name
(RefSeq) rhamnogalacturonate lyase B-like isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104739588
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104739588
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
104739588
NCBI-ProteinID:
XP_010458296
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Position
14:complement(4270668..4275314)
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AA seq
722 aa
AA seq
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MKWCHCQQPNHFQISRKLQDKYADLIMFLFSSHVFKLVTTKDYRRHLLKQRGWVIPLIMF
MSLFEIVISQNQSPEPESTQVLQLHYQDRHVVMDNGIFQLTLSNPEGFVTGIQYNGIENV
LAYDSKEDDRGYWDLVWNFPGKKTKKTKGTLDRIEATKMEVKTQNDELIELSFSRTWNSS
STTAVPVNIDKRFVMLRNSSGFYTYAIFERLQGWPAVELDNIRLAIKLNKDKFHYMAISD
DRQRYMPLPDDRIPPRGQPLAYPEAVQLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWIS
TNDSVGFWQITPSNEFRSAGPLKQFLGSHVGPTNLAIFHSTHYVGADLIMNFKQGEAWKK
VFGPVFIYLNSFPKGVDPLLLWHEAKNQTKIEEEKWPYSFTASDDFPASDQRGSVSGRLL
VRDRFISSEDIPANGSYVGLAAPGDVGSWQREYKGYQFWSKADVNGYFSINNVRSGRYNL
YAFAPGFIGDYHNDTVFDISPGSKTNLGDLVYEPPRDGSTIWEIGVPDRTAAEFYIPDPN
PTFVNKLYSNRSDKYRQYGLWERYSELYPDEDMVYNADVDDHSKKWFFMQVTRKQANGGY
KGTTWQIRFQLDDKMKNLTGNFKLRIALATSNVAELQVRVNDPSANPPLFTTEQIGRDNT
IARHGIHGLYWLYNVNVPDSSLRLGNNTIYLTQPLATSPFQGLMYDYIRLECPDSINYLT
RS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggtgtcactgtcaacaaccgaaccactttcagatttcgagaaagctccaagac
aaatacgctgatttaatcatgtttctgttctcttcacatgtgttcaagctcgtgacgacc
aaagattaccggagacacttattgaaacagagaggatgggttattcctttgatcatgttt
atgtctttgtttgaaattgttatctcccaaaatcaaagccctgagccagaatcaacacaa
gtcttgcagttacattaccaagatcgacatgtggtaatggacaatggaatttttcaatta
actttgtcaaatcctgagggatttgtcactgggatccagtataacggtatcgaaaatgtg
ctagcgtatgacagcaaagaagatgatagaggttactgggacttagtgtggaactttcct
ggaaaaaaaaccaaaaagaccaaaggcacattagaccggattgaagcaacaaagatggaa
gtgaagacgcagaacgatgaactgatagagctatcgttttcaaggacatggaattcatct
tcaaccacggctgttccagtgaatatagacaagaggtttgtaatgttgcgaaactcgtcg
gggttctacacttatgccatcttcgagcggttacaaggatggcccgctgttgaactcgat
aatatccgattagcaattaagctaaacaaggacaagtttcattacatggcgatttcagat
gacaggcagaggtacatgcctttgccagatgatcgaatcccgcctcgaggtcagcctctt
gcttatcccgaggcggttcaacttctcgaccctatcgagcctgagttcaaaggagaggtt
gatgacaagtatgagtactcaatggagagtaaagacataaaagtacatggatggataagc
acaaatgattcagttggattctggcaaatcactccaagcaacgagttccgatctgctgga
cctctcaagcaattcctaggctcccatgtcggtccaaccaacctcgcgatatttcacagc
actcactatgttggagcagatttaatcatgaattttaaacaaggtgaagcatggaagaaa
gtatttggaccagtctttatttatctcaactcttttcctaaaggagttgatcctctcttg
ctctggcatgaagccaagaaccagacaaagattgaagaagagaagtggccttatagcttc
acagcttcagatgattttcctgcatctgaccaaagaggatctgttagcggtagattactc
gtaagagacagattcataagtagtgaggatatacctgcaaatggttcctacgtgggattg
gctgcaccaggagatgttggctcatggcaaagagaatacaaaggttatcagttctggtca
aaagcagacgtaaacggatatttttctatcaataatgtgagaagtggtcgttataatctc
tatgcctttgctcctggattcatcggtgattaccacaacgacaccgtttttgatatttct
ccaggctcaaagactaacctaggggacttggtgtatgaacctcctagagacggttcaact
atatgggaaatcggtgtgccagaccgaaccgctgcagagttctacattcctgaccctaat
ccaacctttgtaaacaaactatactcaaaccgttctgataaataccgacaatacggattg
tgggaacggtattcagaactgtaccccgacgaagatatggtctacaatgctgatgtggat
gatcattctaagaaatggttcttcatgcaagttaccaggaagcaagcaaatggaggatat
aaaggtacaacatggcagatcaggtttcaattggacgataaaatgaaaaacttaaccgga
aacttcaaattgcgaattgctctagctacatcaaatgtagcagaactgcaggttcgggtc
aacgatccttctgcaaatcctccattgttcacgaccgagcaaataggaagggataataca
attgcaagacatggtattcatggactatattggttgtacaatgtgaatgtgcctgattct
tctcttcgcctgggaaacaacaccatatatttaactcaacccctcgccacgagccctttt
caaggactcatgtatgattatattcgtctagaatgtcctgattccatcaattatcttact
agatcatag
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