Camelina sativa (false flax): 104739592
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Entry
104739592 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104739592
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104739592
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
104739592
NCBI-ProteinID:
XP_010458304
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Position
14:complement(4291323..4295073)
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AA seq
633 aa
AA seq
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MSSVKLQLHDKGNHVVMDNGIARVTLSKPDGIVTGIEYNGIDNLLEVLNEEVNRGYWDLV
WGGSGTAGGFDVIKGTNFEVIMKNEEQIEISFTRKWDASLEGKAVPLNIDKRFVMLSGSS
GFYTYAIYEHLKEWPAFSLAETRIAFKLRKEKFHYMAVTDDRQRFMPLPDDRLPDRGQAL
AYPEAILLVNPVEPQFKGEVDDKYQYSCENKDITVHGWICTEQPSVGFWLITPSHEYRTG
GPQKQNLTSHVGPTALAVFMSAHYTGEDLVPKFSEGEAWKKVFGPVFVYLNSSTDDDNDP
LWLWQDAKSQMNVETESWPYSFPASDDYVKAEQRGNVVGRLLVQDRYVDKDFIAANRGYV
GLAVPGAAGSWQRECKDYQFWTRTDEEGFFYISGIRPGQYNLYAWVPGFIGDYKYDDIIT
ITQGCYIYVEDLVYQPPRNGETLWEIGFPDRSAAEFYVPDPNPKYINKLYQNHPDRFRQY
GIWERYAELYPDKDLVYVVGSSDYRKDWFYAQVTRKKDNKTYQGTTWQIKFELKNIDQSH
SYTLRVAIASATFSELQIRVNDATASPLFTSGLIGRDNSIARHGIHGLYWLFNVEVAGSK
LVEGENTLFLTQPRSTSPFQGIMYDYIRFEAPS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctgttaagctgcagttgcatgataagggcaatcatgtggtgatggataatggc
attgcacgggttacattatcaaagcctgatggtattgttaccggaatcgaatataatggc
atcgataacttgctcgaggttcttaatgaagaagtcaacagagggtattgggatctcgtt
tggggaggatcaggaacagctggtggatttgatgtaatcaaaggaacaaactttgaggta
ataatgaagaacgaagaacaaattgagatttctttcacaagaaaatgggatgcatcacta
gaaggcaaagctgtccctctgaacattgacaaaaggtttgttatgcttagtgggtcatca
ggattctacacttacgccatctacgagcatttaaaagaatggcctgctttctcacttgct
gaaacccgaattgccttcaagctcagaaaagagaaatttcactacatggcagtaacggac
gataggcagaggttcatgccattgcctgatgatcggttacctgacagaggccaagctctg
gcttaccctgaagctattctacttgtcaatcctgtagagcctcaattcaaaggagaggtt
gatgataagtaccaatactcatgtgagaacaaagacattactgtccatggatggatatgc
acagagcagccgtcggttggtttctggctcataactcctagccatgagtatcgaaccggt
ggacctcaaaaacagaacttgacatctcacgttggacctactgctcttgctgtgtttatg
agtgcacactacacaggggaagatctagtgccaaagtttagtgaaggagaggcatggaag
aaggtgtttggacctgttttcgtctatttaaactcgtctactgatgatgataatgaccct
ctttggctctggcaagatgctaaatctcagatgaatgtggaaactgaaagctggccttac
agttttccagcttcagatgattatgtgaaagcagagcaacgtggtaatgttgttggcaga
cttctcgttcaagacaggtatgtagataaagatttcattgcagccaatagagggtatgtt
ggtttggctgtgcctggagctgctggttcatggcaaagagaatgcaaggattatcaattt
tggacaagaacagatgaagaaggattcttttacataagtggaatacggccaggacaatac
aatctctatgcatgggttcctggttttatcggcgactacaaatacgatgatattatcacc
atcacccaaggttgttatatatatgtggaagatcttgtatatcaacctccaagaaatgga
gaaacgttatgggagattggttttccagatcgatccgcagcagagttttatgttcctgat
ccgaatccaaaatatatcaacaaactttatcaaaatcaccctgacaggttccgtcaatat
ggaatatgggaaagatacgccgaactatatccggataaagacttggtatatgtagttggc
tctagcgactatagaaaagactggttttacgctcaagttactagaaaaaaggataacaaa
acatatcaaggaacaacatggcaaattaaattcgaactcaaaaacattgatcagagtcac
tcctatactttacgagtagccattgcatccgctactttttccgaactccaaatacgtgtg
aacgatgcaactgcaagcccgttgttcacaagcggactgattgggagagacaactcgata
gcaagacatggaatacatggattgtactggttgttcaatgtggaagtggctggctctaag
cttgtagaaggcgagaatacattgtttctcacacagccaaggtccacaagtcctttccaa
gggatcatgtatgattacatccgatttgaagctcccagctaa
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