Camelina sativa (false flax): 104739593
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Entry
104739593 CDS
T05044
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
104739593
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
104739593
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
OGFr_N
Motif
Other DBs
NCBI-GeneID:
104739593
NCBI-ProteinID:
XP_010458305
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Position
14:complement(4306360..4311708)
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AA seq
671 aa
AA seq
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MKRLADRLRHRFTNHETASNAGHHWTDQGTSGPSHRKDHMMPSQGVKLHIHDRYVVMDNG
ILQVTLSNPGGIITGIKYNGLDNVLEVRNKETNRGYWDLHWNEPGGKGIFDVISGVSFRV
IVETEEQVEISFLRTWDPSLEGKYIPLNIDKRFIMLRGSSGVYSYAIYEHLKDWPGFELG
ETRIAFKLRKDKFHYMAVADDRKRIMPFPDDLCKGRCQTLDYQEASLLTAPCDPRLQGEV
DDKYQYSCENQDLRVHGWISFDPPVGFWQITPSNEFRSGGPLKQNLTSHVGPTTLAVFHS
THYAGKTMMPRFEHGEPWKKVYGPVFIYLNSTASGDDPLSLWDDAKIKMMAEVESWPYSF
VASEDYPKSEERGTARGRLLIRDRFISNDMISAAGAYVGLAPPGGSGSWQIECKGYQFWA
VGDEAGYFSIENVRPGEYNLYAWVPGFIGDYYNGTIVSVTSGCKIEMGDIVYEPPRDGPT
LWDIGIPDRKASEFFIPDPDPTLVNRALVHHQDRFRQYGLWKRYTDLYPNDDLVYTVGVS
DYRRDWFFAQVPRKKGDMHEATTWQIRFKLENIDQKANYKLRIAIASATLAELQIRVNDA
EAVRPLFTTGLIGRDNSIARHGIHGVYMLYEVNIPGNRLVQGDNTIFLRQPRCNGPFQGI
MYDYIRLEGPP
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgaagagactcgctgatcggctccggcatcgtttcactaaccatgaaactgcttcaaac
gccggccaccactggacagatcaaggtacaagtggccctagtcatagaaaggatcacatg
atgccctctcaaggtgtcaagctgcatatccatgacagatatgttgtgatggacaatgga
attctccaagttacactgtcaaacccaggtggaatcatcaccggcataaagtataacggt
cttgacaatgtgctcgaagttcgtaataaggagactaacagagggtactgggacctgcac
tggaatgaacctggaggcaagggaatatttgatgtcatcagtggtgtgagtttcagggtc
atagtcgagactgaagaacaggttgagatctcatttctaagaacatgggatccatccctt
gagggaaagtacattcccctgaatatcgataaaaggtttataatgcttcgtggttcttct
ggagtttactcatacgccatttatgaacacctcaaggattggcctgggtttgaacttgga
gaaacaagaatcgcgttcaagctcagaaaagacaaattccattacatggctgtggcagat
gaccgaaaaaggataatgccttttccagatgatctatgcaaaggaagatgtcaaactcta
gattaccaggaagcttctctgctcactgctccatgtgatccacgcttgcaaggcgaagta
gatgacaaataccaatactcgtgtgagaatcaggatctcagagtacatggatggatatcc
ttcgatccacctgtaggattctggcaaattacgcccagtaatgagtttcgctcaggcgga
ccactcaaacaaaacctcacgtcacatgttggcccaaccactcttgcagtgtttcacagt
acccattatgccggaaaaaccatgatgcctcgctttgaacacggtgagccttggaaaaaa
gtatatggccctgttttcatttacctaaattccacagccagtggagatgatccactttcc
ttatgggacgatgcgaagataaagatgatggctgaggttgaaagttggccttatagcttc
gtggcatctgaggattatccaaagtctgaagaacgtggcacggcccgtggtagattactt
atccgtgacaggttcataagcaatgatatgatttcagcagcaggtgcttatgtgggtttg
gctccacctggtggttctggttcttggcaaattgaatgcaagggataccaattttgggcg
gtaggggatgaggctggctatttctcaatagagaacgtgcgtcctggcgagtataatctc
tatgcctgggtccccggtttcattggagattactataacggcacaattgtttctgtgact
tcagggtgcaagattgaaatgggtgatatcgtttatgaacctccgagagatggacctacc
ttatgggatattggtatccctgaccgaaaagcttctgagttctttatcccagatcctgat
cccacgcttgtaaacagggctttagtccatcatcaagacaggttcaggcaatatgggctg
tggaagagatacacagatttgtatccaaatgatgaccttgtttacactgttggtgtaagc
gattatcgcagagactggttctttgctcaggttccaaggaagaaaggagacatgcatgaa
gcaacaacttggcagattaggtttaaacttgaaaacatcgatcaaaaggcgaattacaaa
ctgagaatcgccatagcatctgcaaccttagccgagttgcagattcgagtcaatgatgcg
gaagcagtccgccctctcttcacaactggactcattgggagagacaattcaatagcaagg
catgggatccatggggtttacatgctgtatgaggtgaacataccaggaaaccggcttgtc
caaggtgataacactatattcctgagacagccaagatgcaatggtcccttccaagggatt
atgtacgactacattcgtcttgaaggccctccataa
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