KEGG   Camelina sativa (false flax): 104739750
Entry
104739750         CDS       T05044                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csat  Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:csat00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csat04812]
    104739750
Cytoskeleton proteins [BR:csat04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     104739750
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_SPT8 ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_EIPR1 eIF2A Beta-prop_IFT122_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_VPS8 PROPPIN VPS8_N DUF6563 Beta-prop_WDR75_2nd Ge1_WD40
Other DBs
NCBI-GeneID: 104739750
NCBI-ProteinID: XP_010458498
LinkDB
Position
14:5051943..5058731
AA seq 1009 aa
MANRGYNLQEFVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSLMSLCGHTSP
VDSVAFNSEEVLVLGGASSGVIKLWDLQEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSR
DTNLRVWDTRKKGCIQTYKGHTRGITTIKFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF
KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFELIGSTRPEATEVRAITFHPDGQT
LFCGLDDGLKVYSWEPVICRDGADMEWSTLGDLCINGGMFIGCSYYRNSIGIWVSDISQL
EPYEAGSEDKKGSMVKRFSVLDDQSSEKMGSGPRCSSSPDYETREIKNIYVDSTGGNLNV
AQNTGSLKVTLPLESGKVATMASEKQDATYFGQTGDKYSSMHSVVSRDSDSGEESSYPER
ESITFSRTKSGMLLRPAHVRKALAKFEESKQSVVVQSRTRKNSGLDVQVEPHTRSVFLSE
QSGSKPFDAEESTIKGITDKFEKVLSSEPPTDEANRMLLKPPRVQRSSNSEYHESKRAIS
VDSGTSDNSKSGLEHSRDRDLPADTEHPGGSRELNPMEIVEGVKVVSGRTRSLVERFERG
EKSTHTEAASTTIAQNTNAVQEDPHTTSRQTGQTAVISTRRARSTPARVMPVVLNRDSNM
TSNEPPLTQPARTSSVPVIFSQATSVTYDEPSVTQQSRTSPIRRLPVTINQATNIASNEA
SVTSRRPRRTSSARVKHTSLSQAMDMTSHECPVTSSRPSRISPARVMPTKLNQSDYVTSD
TSHIASRHRVSPTQMLATPTVIDQVPDIELDETHVAQIQPACENLPQKEEPQISGRENDS
EITDTLMQTHDEFLSTLQSRLAKLQIVRHFWERNDVKGAIGALRKLTDQSVQADVISILT
DKIEILTLDMFSQLVPVLTSLLGSRTERPVNVSLDMLLKLVAVFGTVIHSTVSAPRIVGV
DLHADERLQICQVCSAGLHKIQRILPVLARRGGLITRKAQELNLVLQEP
NT seq 3030 nt   +upstreamnt  +downstreamnt
atggcgaatcgtggttataacctgcaggagtttgtggcacattctggaaatgtgaattgc
ctaagtatcggaaagaagacatcacgtctccttcttactggtggagatgattataaggtc
aacctttggtctatcggcaagaccacttcgctaatgagtctttgtgggcatacaagcccg
gttgactcagtagctttcaactccgaagaagttttggtgctaggtggagcttcttcaggt
gtgataaagctgtgggatctacaagaagcaaagatggttcgagcttttactggacataga
tccaactgttctgctgttgagtttcatccatttggtgaatttcttgcatccggatccaga
gacacaaatctaagggtttgggataccagaaagaaggggtgcatccaaacatataagggt
catactcgtggcattaccactatcaaatttagtcctgatggtcgttgggtcgtttctgga
ggacttgacaacgttgttaaggtatgggatttgactgctggaaagctcttgcatgagttt
aagtttcatgaaggacctatccgttccctagacttccatccacttgagtttctcctagca
acaggttctgctgacaggactgtgaaattctgggatctggaaacgtttgaactgattgga
tctactagaccagaggctactgaagttcgtgcaatcacttttcatccagatgggcaaact
cttttctgtggattggatgatggcttaaaggtttattcatgggaaccagtgatttgccgg
gatggtgctgatatggagtggtcaacacttggtgacttatgcatcaacggaggaatgttc
attggttgttcatattaccgaaattctattgggatttgggtctcagatatatcgcaactt
gagccatatgaagctggatctgaggataagaaaggaagcatggtgaaaagattcagtgtc
ttggatgatcagtcgtctgagaaaatgggaagtggtccaaggtgtagttcatccccagat
tacgagacaagagagataaagaacatatacgttgactccacaggtggaaatttgaatgtt
gcgcaaaatacaggatctctgaaagtgacattgcctttggaatcaggaaaagtagctact
atggcgagtgagaagcaggatgcaacatattttggacaaacaggagataagtattctagt
atgcatagtgttgtatctcgagatagtgatagtggagaggaatcttcttatccagaaagg
gaatctatcactttctcaagaactaaatcgggtatgttgctaagaccagctcatgtaaga
aaggcgctagcaaagttcgaagaatcaaagcagtcagtggttgttcaatccagaactcgg
aagaacagcggactggatgttcaagtggagccacacactcgaagtgtgttcctttcagaa
cagagtggtagtaaaccatttgatgcggaggagtctaccatcaagggtattacagacaag
tttgaaaaagttttatcatcggaaccaccaactgatgaagcgaatcgtatgcttcttaaa
ccacctcgtgtacaaaggtcatcgaatagcgagtatcatgagtcaaaacgagcaatatct
gttgattctgggacttctgacaacagcaaaagtgggttggagcactctagagaccgtgac
ttgcctgcagacactgaacaccctggaggcagtagagaattaaatcccatggagattgtt
gaaggagtaaaagttgtctcagggaggacacgctcgttggttgagaggtttgaaagagga
gaaaaaagtactcataccgaagcagccagtaccaccatagctcaaaacactaatgcggtg
caggaagatccgcatacaacatcaagacagacaggacaaactgctgtaatatcaacacga
cgagctaggagtactccagccagagtgatgcctgttgttctcaatagggatagtaacatg
acatctaatgagcctcctttaacacaaccagctaggacttcttccgttccagtgatattc
agtcaagctactagtgtcacatatgatgagccttctgtaacacaacaatctagaacttct
cccatccggagattgcctgtgacaatcaatcaggcgacaaatatcgcatctaatgaggct
tctgtaacatcaaggcgaccacgcaggacttcttcagcacgagtaaagcatacgtcactc
agtcaggcaatggacatgacatctcatgagtgtcctgtaacatcatcacgtccatctagg
atttctccggcccgtgtaatgcccacaaaactaaatcagtctgattatgtgacatctgat
acatctcatatagcatccaggcaccgagttagtccaactcaaatgctggctacacccact
gtgattgatcaggtacccgatatagaactggatgagacacatgtagcacaaatacaacca
gcttgcgagaacttaccgcagaaggaagagcctcaaatatctgggagggaaaatgatagt
gaaatcactgatactctaatgcaaactcatgatgagttcttaagcactcttcaatcgagg
ttggcaaagttacaaattgtaagacatttttgggagcgtaacgatgttaaaggtgccatc
ggggcattgagaaagctgacagatcagtctgttcaagcagatgtaatcagtattctaacc
gacaaaatagaaattctcacattggatatgttttctcaattggttcctgtcctcacaagc
ttattgggtagcaggacagagaggccggtaaatgtctccttggatatgctcttgaagctt
gtagcagtgttcggtacagttatacactcaactgtctcagctccacgaattgtcggcgtt
gatcttcatgcagatgaaaggctacaaatctgccaagtatgttctgcgggattgcacaag
attcaaaggattcttccagttctcgcaagaagaggcggtctaataacaagaaaggctcaa
gaattaaacctagttcttcaagagccatag

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