Camelina sativa (false flax): 104739971
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Entry
104739971 CDS
T05044
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104739971
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
104739971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
Motif
Other DBs
NCBI-GeneID:
104739971
NCBI-ProteinID:
XP_010458760
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All DBs
Position
14:6259682..6264330
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AA seq
793 aa
AA seq
DB search
MVGSLGLTPESLKASGRSSENVSLLILQGKIKRDPEGYETELQLIYKQFLTSVDLFKQQG
ALSFSSVVGIGSDPSVAKELGDRAMFLAHVTPFYPKQLAAFPAQLTDLLRTSCLAMPSGL
RNHVAQALILLMNRKSLVIEDLLALFLDIQTLGDKNLRTLAFSHIVQTIRKMSATDPKHK
SLQKIVISMLELEDEAKAKRALATLCALHKKKIWLGDRNERVAIAICEACFHTSPRIMIS
ALRFLLDYENIDDDDDSDAESDDDEETKKISQVVINRQAVYKANNKGTSSSKKKKQAKLQ
RAVKSIKRKQRSSSENTTSAFSPLNHLNDAQKFAEKLFSRLQTIKGTGERAETRLMMIKV
IARTIGLHKLHLLSFYSFLQNYAMPHVKDITQILAAAVQSCHDGVPSNAVEPLFKQIVNQ
FVHDRSRPEAIAVGLNVVREMCLRIHDLMTEELLQDLALYKKSHEKAISAAARSLIALFR
EINPSLLVKKDRGRPGATVVKPKQYGEANVFSNVPNVELLQESDHESGSDDDQDDDGDTE
LLSGDDVEQELIPEDCGSEDEAEEDDSDIDTSIGGDEDEEMNDSDGAETDSENEEMESED
DDGDASDSSGEDSGNEEKAKGTKRKIVDFDANLLSADTSLRALKRFAEAKNEKPSFDESD
GILSNEDFRKIKELQAKKEAKIALARKGFKVPDSDQLSKKRVDPAKLEAHIRHKLTKEQR
LELVKAGREDRGKYQARAAIKQKKTGGSSNKQKEHRKNMPLAAIRSKAGKSKRTKKMKNS
LSGSQFRGRKAWK
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtcggatctctaggtttaacgccggaatccttaaaggcatctggccggagctccgag
aatgtcagccttcttatccttcaaggtaaaatcaaacgtgacccagaaggttacgaaacg
gagctccagttgatttacaaacagttcttaacctccgtcgatctcttcaagcaacaagga
gctctcagtttttcctctgttgttggcattggctctgacccttctgttgccaaagaactc
ggcgaccgtgccatgtttctagctcacgttactcccttttacccgaagcaactcgcggcg
tttccagctcagttgactgatttgctccgtacttcgtgcttggcaatgccctcgggactt
cggaaccatgttgcacaagctctgattcttctaatgaatcgaaagagtcttgtcatcgag
gatttgctggctttatttctggatattcagactcttggtgacaaaaaccttcggactctt
gctttttctcatattgttcaaaccattcgtaaaatgagtgccactgatcccaagcacaaa
tcacttcagaagattgtaatctctatgcttgagctagaagatgaagcaaaggctaagaga
gcacttgctactctttgtgcgttacacaagaaaaagatctggcttggtgatagaaatgaa
agagttgcaattgcaatctgtgaagcctgctttcatacttcacctaggataatgatttcc
gcccttagatttcttctcgactatgagaacattgacgatgatgacgatagtgatgctgaa
agcgatgatgacgaagagacaaagaaaatatctcaagttgtgattaatcgacaggctgtt
tacaaggcaaacaacaaaggtacatcctctagcaagaagaaaaagcaagcaaaactgcag
cgtgcagtgaaaagtataaaaagaaagcagcgttcgtcgtctgagaacaccacttcagca
ttttcacctcttaatcatttaaacgatgctcagaaattcgcggagaaattgttttcccgt
cttcagaccataaagggcactggtgaacgtgctgagaccaggttgatgatgattaaagtt
attgctcgcacaattggtcttcacaagttgcatttactaagtttctattcttttcttcag
aactatgctatgccgcatgtaaaggacattacacaaatacttgcagcagcagttcagtct
tgccacgatggggttccttctaatgccgtggagccactgttcaagcaaatagtgaatcag
tttgtacacgatcgttcacgtcctgaggctattgctgttggactcaatgtggtacgagaa
atgtgcctgaggattcacgatttgatgacggaagaattgctgcaagatcttgctctgtat
aaaaagtcccatgaaaaagccatctcagcagcagctcgttccctcatagcattgttcaga
gagatcaatccttcgcttctggttaaaaaagatcgtggccgtcctggagctactgttgtc
aaacctaaacaatatggagaggctaatgtcttcagcaatgttcccaatgttgaattattg
caagaaagtgatcatgagagtggctctgacgatgatcaagatgatgatggtgacacggag
ttgctaagcggcgatgatgttgagcaggagctgatacctgaagattgtggaagcgaggac
gaagctgaagaagatgatagtgatattgatacctcaataggaggtgatgaagacgaagag
atgaatgatagtgatggagctgagactgattcggaaaatgaggagatggaaagtgaagac
gacgatggagacgcttctgattcttctggagaagatagtggaaacgaagagaaagcaaag
gggacgaagaggaagattgttgattttgatgcgaatcttctttctgctgatacaagccta
cgagcactcaagagattcgcagaagcaaagaacgagaaaccatcttttgatgaaagtgat
ggcatactttcgaatgaagacttccgaaaaatcaaagaacttcaggcaaagaaggaagca
aaaattgcattggctcgaaaaggattcaaggttccggactcggatcagctaagtaagaag
cgagttgatccagccaagcttgaagctcacataaggcataagctaacaaaagagcaaaga
ctggaactagttaaagctggaagggaggaccgagggaaataccaagccagggctgccatc
aaacagaagaagactggaggatcaagcaataaacagaaggaacacaggaagaatatgcct
cttgctgcaataagatcaaaggctgggaaatcaaagcgaaccaagaagatgaagaatagc
ctcagtggaagccagtttagaggaaggaaagcttggaagtga
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