Camelina sativa (false flax): 104739975
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Entry
104739975 CDS
T05044
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6-like isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104739975
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104739975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104739975
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
104739975
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
104739975
NCBI-ProteinID:
XP_010458765
UniProt:
A0ABM1QYC2
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Position
14:6279165..6282278
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AA seq
582 aa
AA seq
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MTEDNVDYGGNQKILHQGSGTIPALADEELMGDDDEYDDLYSDVNVGESFYQAHNPPQPP
PAQVGGTGNASLQAQNTTSVAAEPRMGILSGGGTVEGKYRNDGGHNGIISGPDTRSDVYP
QASSFGAKGLNIDMQSNNKIVQQGSTSIVLNNHGFSGNAVNVPELPVHNSYGAVPQGAQQ
IPVSQMSVIPNVMVNKSPTQSFVVDNGNTMLFVGELHWWTTDAEIESILSQYGRVKEIKF
FDERVSGKSKGYCQVEFYDSAAAAACKEGMNGYIFNGKACVVAFASPETLKQMGANFTGR
NQGQNQIQNRRPMNEGMGRGNNNNNNNNMNTQNGDGGRNYGRGGFARGGQGMGNRGGPWG
GAMRGRGVNNMTSGSNAGPYGPGLAGPAFGGMMHPQGMMGAGGFDPTFMGRGGAYGGYSG
LAYPGMPHSYPGVNAMGMVGIAPHVNPAFFGTGMGTMGSSGMNGVHAAAMWSEANGGGGE
EGGSEYGGYEDETQEKEEKPSRDKERATTEREWSESSGDRRHKSHRDEKDSHREYKQQRD
RDSDEFDRGQSSMKSRSRSRMAEDDHRSRSRDADYGKRRRGD
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagacaacgttgactatggaggtaaccagaagatattacatcaaggaagcgga
actatacctgctctagcggatgaagaacttatgggagacgatgatgagtacgatgatctg
tatagcgatgttaatgttggtgagagtttctaccaagctcataatccgcctcaaccacca
ccagctcaagtcggtggtacaggtaatgcaagtcttcaagctcagaatactactagtgtt
gctgctgaaccgagaatggggattttatctggaggaggtactgttgaagggaagtatcga
aatgatggagggcataatggaataatcagtggaccagacacaaggtctgatgtttatcca
caagcatcttcttttggagctaaagggttgaatattgatatgcaatccaacaacaaaatc
gttcaacaaggatcaacatctattgtgttaaacaaccatggattttcaggtaacgctgtg
aatgtgcctgagctgcctgtgcataactcttatggtgctgttcctcaaggtgctcagcag
attcctgttagccagatgagtgtgattccgaatgtaatggtgaacaaaagccctacgcag
tcatttgttgtggacaatggaaacaccatgctttttgttggagagttacactggtggacg
acggatgcagagattgagagtattctttcacagtatggaagagtcaaagagatcaagttt
ttcgatgagagagttagtggcaaatctaaagggtattgtcaggttgagttttatgattca
gctgctgcagccgcttgcaaagaaggaatgaatggttatattttcaacggtaaagcatgt
gttgttgcctttgcttctcctgagacactgaagcagatgggagctaatttcactgggagg
aaccagggacaaaaccaaattcaaaacagaaggcctatgaatgaaggaatgggaagaggt
aataacaacaacaacaacaacaacatgaatacgcaaaatggagatggtggaagaaattac
gggagaggtggatttgcgcgtggtggccaaggaatgggcaaccgtggaggtccctggggt
ggtgcaatgagaggtagaggggtgaacaacatgactagtggttctaatgctggaccgtat
gggcctggactagctggtcctgcatttggtggtatgatgcatccacagggtatgatggga
gctggtgggtttgatccaacattcatgggtcggggtggtgcttatggagggtattcaggt
cttgcttaccctgggatgcctcattcttatcctggtgttaatgcaatgggaatggttggg
attgctcctcatgtcaatcccgccttctttggcacgggaatgggaacaatgggtagctca
gggatgaatggagttcatgcagcagctatgtggagcgaggctaatggaggtggtggtgaa
gagggtggttctgaatatggtgggtatgaagatgaaacccaagagaaagaagaaaagcca
tcacgagataaagaacgggccaccacggaacgtgagtggtctgagagcagtggtgataga
agacacaagagccatcgtgatgagaaagatagtcaccgtgagtataagcagcagagagac
cgtgattctgatgagttcgatagaggacaatctagtatgaaatctcgaagcagatcaaga
atggcagaagatgatcataggtccaggtcaagagatgcagactatgggaagaggagacga
ggcgactga
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