KEGG   Camelina sativa (false flax): 104740206
Entry
104740206         CDS       T05044                                 
Name
(RefSeq) pinin-like
  KO
K13114  pinin
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    104740206
   03015 mRNA surveillance pathway
    104740206
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104740206
   03041 Spliceosome [BR:csat03041]
    104740206
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     104740206
Spliceosome [BR:csat03041]
 Complex C
  Other components
   EJC/TREX
    104740206
SSDB
Motif
Pfam: Pinin_SDK_memA DUF4715 MIIP
Other DBs
NCBI-GeneID: 104740206
NCBI-ProteinID: XP_010459038
LinkDB
Position
14:complement(7255994..7258848)
AA seq 424 aa
MGDTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSGVAPRNQGRRGFTRPAD
RNDVEDEPPAKRRLSSAVVKVDGEDVSKDEDLPVDGNGTEVVAGENGTSDKSDKKLSGQH
RGDRPRRDTEQRGTKKGFEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLQGTLEKFRKE
DKQRSGTDAYARRSAALQKAEQKSREESERLRLQERENLTEKRRRDLTLRARVAAKAEQK
KLELLFLQWSEHQKKLSKFIRTKAEPQIYYALVKPLEEDTTEVEQQKEQTFLEWKAARRQ
EVSEYQKEIEEQYLGNVEKELERWQNARNARKANNNGAMNLQETMDKELETHRMEHGPKK
RKIPGGGVGDEEEEDEVEDINGGDDDMIMDDILDEGRDGNIKEEGATDTVKAEAVEEDIK
AEVV
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggagacaccgccttggagaagacagcggaagagctacgacacgagatcgatgagctt
caccgtcagcagcgcgagattacggagaggcttcgtgaccctcgtggactccgtcgtgga
ggcttttcaggcgtcgctcctcgcaatcaaggccgtagaggctttactcgtcctgcggat
aggaatgacgtagaagatgagccacctgcgaaacggagattgtcttccgccgttgttaag
gtcgatggtgaagatgttagtaaggatgaagatttgccagttgatggcaatggaaccgag
gttgtagctggtgaaaatggaacctctgataaaagtgacaagaagctatctggacagcat
cgtggagatcgaccccggagggatacagaacaacgagggaccaagaagggttttgaagct
tttgcattgccggagcctgcaccaagggttttacctaagaatgaggatcctaaattggtt
aataggaacagaagaatgctggggaatcttcaagggactttggagaagttcagaaaagaa
gataagcagcgttctggaacggatgcatacgcccgacggtccgctgccctacaaaaggct
gagcaaaagtcccgtgaagaaagtgaacggctgaggctgcaagagcgtgaaaatctgacc
gaaaagaggagaagagatcttactcttcgagcccgtgttgctgctaaagcagaacaaaag
aagttggaactgcttttccttcagtggagtgagcaccaaaaaaaacttagcaaatttata
aggacaaaagcagagccccagatatactatgcgctagtgaagcctttggaagaagataca
actgaggtggagcaacagaaagagcagacattcttagaatggaaggcggcaaggagacaa
gaagtgagcgagtatcaaaaggaaatagaagagcaatatctgggtaatgtagagaaagag
ctggagaggtggcaaaacgcaaggaatgcgaggaaagcaaacaacaacggggcaatgaat
ttgcaggaaacaatggataaggaattagagacgcataggatggagcacgggccaaagaag
agaaagatacctggcggaggagtaggagatgaagaggaagaagatgaagtagaggatatc
aatggtggggatgatgacatgataatggatgatatacttgacgaggggagagatggaaac
atcaaggaggaaggggcaactgatacagtaaaagcagaagcagtagaggaagacattaaa
gctgaggtcgtctag

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