Camelina sativa (false flax): 104740206
Help
Entry
104740206 CDS
T05044
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104740206
03015 mRNA surveillance pathway
104740206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104740206
03041 Spliceosome [BR:
csat03041
]
104740206
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104740206
Spliceosome [BR:
csat03041
]
Complex C
Other components
EJC/TREX
104740206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
DUF4715
MIIP
Motif
Other DBs
NCBI-GeneID:
104740206
NCBI-ProteinID:
XP_010459038
LinkDB
All DBs
Position
14:complement(7255994..7258848)
Genome browser
AA seq
424 aa
AA seq
DB search
MGDTALEKTAEELRHEIDELHRQQREITERLRDPRGLRRGGFSGVAPRNQGRRGFTRPAD
RNDVEDEPPAKRRLSSAVVKVDGEDVSKDEDLPVDGNGTEVVAGENGTSDKSDKKLSGQH
RGDRPRRDTEQRGTKKGFEAFALPEPAPRVLPKNEDPKLVNRNRRMLGNLQGTLEKFRKE
DKQRSGTDAYARRSAALQKAEQKSREESERLRLQERENLTEKRRRDLTLRARVAAKAEQK
KLELLFLQWSEHQKKLSKFIRTKAEPQIYYALVKPLEEDTTEVEQQKEQTFLEWKAARRQ
EVSEYQKEIEEQYLGNVEKELERWQNARNARKANNNGAMNLQETMDKELETHRMEHGPKK
RKIPGGGVGDEEEEDEVEDINGGDDDMIMDDILDEGRDGNIKEEGATDTVKAEAVEEDIK
AEVV
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaccgccttggagaagacagcggaagagctacgacacgagatcgatgagctt
caccgtcagcagcgcgagattacggagaggcttcgtgaccctcgtggactccgtcgtgga
ggcttttcaggcgtcgctcctcgcaatcaaggccgtagaggctttactcgtcctgcggat
aggaatgacgtagaagatgagccacctgcgaaacggagattgtcttccgccgttgttaag
gtcgatggtgaagatgttagtaaggatgaagatttgccagttgatggcaatggaaccgag
gttgtagctggtgaaaatggaacctctgataaaagtgacaagaagctatctggacagcat
cgtggagatcgaccccggagggatacagaacaacgagggaccaagaagggttttgaagct
tttgcattgccggagcctgcaccaagggttttacctaagaatgaggatcctaaattggtt
aataggaacagaagaatgctggggaatcttcaagggactttggagaagttcagaaaagaa
gataagcagcgttctggaacggatgcatacgcccgacggtccgctgccctacaaaaggct
gagcaaaagtcccgtgaagaaagtgaacggctgaggctgcaagagcgtgaaaatctgacc
gaaaagaggagaagagatcttactcttcgagcccgtgttgctgctaaagcagaacaaaag
aagttggaactgcttttccttcagtggagtgagcaccaaaaaaaacttagcaaatttata
aggacaaaagcagagccccagatatactatgcgctagtgaagcctttggaagaagataca
actgaggtggagcaacagaaagagcagacattcttagaatggaaggcggcaaggagacaa
gaagtgagcgagtatcaaaaggaaatagaagagcaatatctgggtaatgtagagaaagag
ctggagaggtggcaaaacgcaaggaatgcgaggaaagcaaacaacaacggggcaatgaat
ttgcaggaaacaatggataaggaattagagacgcataggatggagcacgggccaaagaag
agaaagatacctggcggaggagtaggagatgaagaggaagaagatgaagtagaggatatc
aatggtggggatgatgacatgataatggatgatatacttgacgaggggagagatggaaac
atcaaggaggaaggggcaactgatacagtaaaagcagaagcagtagaggaagacattaaa
gctgaggtcgtctag
DBGET
integrated database retrieval system