Camelina sativa (false flax): 104740395
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Entry
104740395 CDS
T05044
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1
KO
K13103
tuftelin-interacting protein 11
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104740395
Spliceosome [BR:
csat03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
104740395
Other components
Complex C specific factors
104740395
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Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
104740395
NCBI-ProteinID:
XP_010459271
UniProt:
A0ABM0VPJ7
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Position
14:8093112..8095943
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AA seq
851 aa
AA seq
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MDEYQEMEKFSMDNDYEGGRWEGDEFVYEKRKEKRKQTKHDATYGIFAESDSDSDYSSGG
GSRRKRRKDRDSGMKAGLTKPVSFVSTGTVSPTREIDKDSREHNGDKNSDKIEDGDMIDE
DVSVRGGLGIGSSGLGLGFNSNGFDDEDNLLPGALGKKIADRAKMRGKAKMEKRGQEVGG
AKGGKKKTLSNDIGQFEKSTKGIGMKLLEKMGYQGGGLGKNQQGIVAPIEVQLRPKNMGM
GYNDFKEAKLPDLNKVEEKKIVGVSVSEIEQRHCDSGGRNLWKKKKKVRKEVYVTAEELL
EKKQEEGFGGGQTIIDMRGPQVRVVTNLENLDAEEKAKEADVPMPELQHNLRLIVDLVEH
EIQKIDRDLRNERESALSLQQEKEMLITEEEKQKRHLVNMEYIADEISRIELENTSGNLT
LDSLANRFEDLQASYPDDYKLCNLSTIACSLALPLFIRMFQGWDPLRDAVHGLQAISSWR
KLLEVQEDQNIWVVSTPYSQLVSEVVLPAVRIAGINSWEPRDPEPMLTFLETWENLLPSS
VLHTILDTVVLPKLSTAVEYWDPQRERVAIHVWVHPWLPILGQKLEFMYQIIQMKLSNVL
DAWYPNDQSVYTILSPWKTVFDATSWEQLMRRYIVPKLQLVLQEFQVNPRGQDLERFHWV
MMWASAVPIHLMADLMERFFFPKWLDVLYHWLLSKPSFEEIHGWYSGWKSLFPQELSANE
RIRIQLKRGLDMLMEIVEGVEVSQPRAKANVHRQSEPAKAQPQAKARQMDSTEVLSLKEV
LEIFAQEKELLFKPKPNRMHNGLQIYGFGNVSVIIDSVNQKLFAQKDGGWFLVTPDDLLR
MHNNTTVSGKR
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggacgagtatcaagagatggagaaattcagtatggataatgactatgaaggaggtcga
tgggaaggtgacgagtttgtgtacgaaaagaggaaagagaagcggaaacaaaccaaacac
gacgctacttatggaatcttcgctgagagcgattctgattccgattactctagcggcgga
ggatctaggaggaagaggcgtaaggatcgagactcgggaatgaaggccggcttaaccaag
cctgtcagttttgtttctacaggtacggtatcgccgactcgagagattgataaggattct
agagaacataacggtgataaaaatagtgataaaatcgaagatggtgatatgattgatgag
gatgtttcagttagaggtggattgggtattggaagctcaggtttagggttagggtttaat
tcgaatggttttgatgatgaggacaatctcttaccgggtgcactggggaagaagatagct
gatagggcaaagatgagagggaaggcaaagatggagaagagaggtcaagaggttggtggt
gcaaagggagggaagaagaagactttgagcaatgatataggacagtttgagaagtctact
aaaggaattggtatgaagctgcttgaaaagatggggtatcaggggggtggccttgggaag
aatcagcaaggtattgtcgctcctattgaagtgcagttgaggccgaagaatatgggtatg
gggtacaatgatttcaaggaggctaagttgcctgatttaaataaggttgaggagaagaag
attgttggtgtcagtgttagtgagattgaacagcgtcattgtgatagcggagggagaaat
ctttggaagaagaagaagaaggtgaggaaggaagtttatgtcactgcagaggagttgtta
gagaagaagcaggaagagggttttggtggtggtcagaccattattgatatgcgaggacca
caggttcgggttgtgacgaatttggaaaatttagatgcagaggagaaagcaaaagaagca
gatgttccaatgccagagttacaacacaacttgcgcttgattgtcgatctagttgagcat
gaaattcagaagattgatagggacttgaggaacgagagagaatcagccttgagcttacag
caggagaaggaaatgcttataacagaggaagagaaacaaaaaagacacttagtcaacatg
gaatatatcgcagatgaaataagtcgaatcgagctggagaatacatctgggaatttgaca
cttgactcacttgctaatcgtttcgaggacctgcaagcaagctaccctgatgattataag
ctttgtaacttgtccaccattgcttgctcactggccttgcctctctttatcagaatgttt
caaggttgggaccctcttagggatgcagtgcatggtctccaggctatatcttcttggaga
aagcttttagaagtccaggaagaccaaaatatctgggtagtctcgacgccttatagccaa
ctagtctcggaggtagtgttacctgctgtgcgaatagcaggcattaattcctgggaacct
agagaccctgagccgatgcttacatttctagagacatgggaaaatttgctgccttcctct
gtcttgcatacgattttggacacagtagtgctgccaaaattgtcaactgctgttgaatat
tgggatccccaaagggaacgtgttgccatccatgtttgggtgcatccttggttgcctata
cttggtcagaagttggagtttatgtaccagataattcagatgaaattgagtaatgttctt
gatgcttggtatcctaatgatcagtctgtctacactattctttcgccatggaagaccgtt
tttgatgctacaagctgggaacagcttatgcgccgttacatagttcccaaacttcagctg
gttttgcaagagtttcaggtaaacccgagaggccaggatttagaaaggttccattgggtt
atgatgtgggcatctgcagtacccatacatctaatggctgatttgatggagaggttcttc
ttcccaaaatggctggatgtgttgtaccattggttactgtctaaaccgagtttcgaagag
atccacggatggtattctggttggaaatcattattcccgcaagagctttcagcaaacgag
aggatccgaatccagttaaagcgtggtttagatatgttgatggaaattgttgaaggagtt
gaagtgtctcagccaagggcaaaggcaaatgtgcatagacagtccgagccagctaaggct
caacctcaagctaaggctcggcagatggatagcactgaggtgctgagtttgaaagaagtg
ttggaaatatttgcgcaagagaaggagttgctgttcaaacctaaaccgaatagaatgcac
aatggtcttcagatatatgggtttgggaacgtaagtgtgataatagactcagtgaatcag
aagctgttcgctcagaaagatggaggttggtttcttgtaactcctgatgacttattgagg
atgcacaacaataccactgtttctgggaaacgatag
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