Camelina sativa (false flax): 104741235
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Entry
104741235 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104741235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104741235
03110 Chaperones and folding catalysts [BR:
csat03110
]
104741235
03029 Mitochondrial biogenesis [BR:
csat03029
]
104741235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104741235
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104741235
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104741235
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104741235
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104741235
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104741235
Exosomal proteins of other body fluids (saliva and urine)
104741235
Exosomal proteins of breast cancer cells
104741235
Exosomal proteins of colorectal cancer cells
104741235
Exosomal proteins of bladder cancer cells
104741235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104741235
NCBI-ProteinID:
XP_010460335
UniProt:
A0ABM1QWU6
LinkDB
All DBs
Position
14:12742546..12748689
Genome browser
AA seq
636 aa
AA seq
DB search
MTSFSHLIILLLAEADSSVSSPLLGSTAMASSQAALSALPLADRTFRKKPSSASSNFGLR
ARAAAKQVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLPNKYGPPKIVNDGETV
LKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVVSAGINPIQV
ARGIEKTAKALVLELKSMSREIEDHELADVAAVSAGNDYEVGNMISNAFQQVGRAGVVTI
EKGRYLVNNLEIVEGMQFNRGYLSQYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKIL
DAAVKEEFPVLIVAEDIEQDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCLDDLAIFTG
ATVIRDEMGLSLEKAGKEVLGTAKRVLVTKDSTLIVTNGDTQKAVDERVSQIKNLIQNTN
ESFQKKILNERVARLSGGIAIIQVGAQTQVELKDKQLKVEDALNATKSAIEEGIVVGGGC
ALLRLASKVDRIKDTLDNTEQKIGAEIFKKALSYPIRLIAKNAGTNGNIVIEKVLSNKNT
MYGYNAAKNQYEDLMSAGIIDPTKVVRCCLEHAASVAQTFLTSDCVVVEIKEIKPRPIIN
PPLPTSPPATSSMFPDRKLPRFPQIMPRTRNHFPRK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgacatctttttcccaccttataatcttgttactcgcagaagctgatagttctgtttct
agtcctttgctcggttcaactgcaatggcttcctcacaagctgcactctctgcgttgcct
cttgctgatcgaactttccgcaaaaaaccttcttctgcttcttcgaattttggccttaga
gcaagagctgctgcgaaacaagttcactttaaccgtgatggctctgtcaccaagaagctt
caggcaggtgcagatatggtggctaagctattgggcgtgacattgggtcctaagggacga
aacgtggtgttgccgaacaagtacggacctcccaagatcgtcaatgacggtgaaactgtt
cttaaagagattgaattagaggaccctctagagaatgttggagtgaaacttgtgagacaa
gcgggtgctaagactaatgaccttgcgggtgatggttccactacatctataattcttgct
catggccttattactgaaggtattaaggtggtttcggctggaataaatcctattcaagtt
gcccgcggtatcgagaaaacagcaaaagctcttgttttagagctcaagtcaatgtccaga
gagattgaggatcatgagcttgctgatgttgctgcagttagtgcggggaatgactacgaa
gtgggaaacatgatttccaatgcttttcaacaagtaggtagggctggtgtagttacaata
gagaaaggaagataccttgtgaacaatcttgagattgtggaaggaatgcagtttaatcgt
ggttatttatcgcaatactttgtcactgatcgaaggaagagggaagctgaattccatgac
tgcaagctgcttttggttgataagaaaataacaaatccaaaagatatgttcaagatattg
gatgctgctgttaaagaggagtttccagttcttatagttgccgaagatatcgaacaagac
gctcttgctcctgttattaggaacaaactaaaaggtaacttgaaggttgcagccattaaa
gctcctgcctttggagagcgcaagagtcactgcttggatgatcttgcaatctttactgga
gctaccgtgatcagagatgagatgggactgagcttagaaaaggctggaaaggaggtctta
ggaacagcaaaaagggttcttgttactaaggattcaacactgattgttacaaatggagac
acccagaaagcagtagacgaaagggtttctcagattaaaaatcttatccagaacaccaat
gagagttttcagaagaagatcctcaatgaaagagtagccagattatctggtggaattgca
ataatccaggtaggtgcacagacacaagttgagttgaaggataaacagctaaaggttgaa
gatgccctgaatgcaactaagtcagcaattgaagaagggattgtagttggtggtggttgc
gccctcttgcgactggcttcaaaagtggacagaatcaaagacacccttgacaacacagaa
cagaagattggagctgaaatatttaagaaagcgttgagctaccccataagactcatagcc
aaaaacgcaggcacaaatggaaatatcgtcatagaaaaggtcttatcgaacaaaaacact
atgtacggttacaatgctgcaaagaatcaatatgaagatctgatgtcagctggtataatc
gatccaaccaaggttgtaagatgttgcttggaacacgctgcatcagtggctcaaaccttt
ctgacatcggattgtgttgtagttgagatcaaagaaatcaaacccagaccaatcattaat
ccaccattgcctacttctcctccagctacttcctccatgttccctgacagaaaactgcca
agatttcctcaaattatgccaagaactcgaaaccactttccaagaaagtag
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