Camelina sativa (false flax): 104741582
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Entry
104741582 CDS
T05044
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104741582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104741582
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104741582
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
104741582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
104741582
NCBI-ProteinID:
XP_010460770
LinkDB
All DBs
Position
14:complement(15249632..15257975)
Genome browser
AA seq
1190 aa
AA seq
DB search
MVVNAKDSTVPNVEDFRELHNLVTHHIESFDYMTDKGLDVMFNRIKPVTVYDSDSDNNLS
IWLENPVVFAPQKESSSSTSRKESLFPFEARQAKISYTGTFMADVCFKYNDEVVVRDKFD
FGQFPIMLMSKLCSLRGADCRKLLKCKESTSEMGGYFVLNGIERVFRCVIAPKRNHPTSM
IRNSFRDRREGYSDKAVAIRCVRDDQSSVTVKLYYLRNGSARVGFWIGGREYLLPVGLVL
KALIETNDEEIYKCLNCCYNENYGRGDGAIGTQLVRERAKIILDEVRDLGLFTREQCRKH
LGEHFQPVLDGLEKEKYPTVAEAVLRDFIFVHLDNDDDKFNLLIFIIQKLYSLVDQTSLP
DNPDSLQNQEILVPGHLITIYLKEKLEDWLRKCKSLLKDELHNKSSKSKFSFESLADVKK
VINKNPPRSIGTSIETLLKTGRMNTQSGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTTVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRISRITSQFDSKGNIRDFLKI
RKSVVEVLVGVGMVPSLPKLVRAAPPEVIHVLLDGQVVGTLSSNVVTDVVSYLRRLKVEA
PSVIPEDLEVGYVPTSMGGSYPGLYLASCPARFIRPVKNISIPSENIELIGPFEQVYMEI
SCPDGGNGGRNNSCSATHEEIHPTGMISVVANLTPWSDHNQSPRNMYQCQMAKQTMAYST
QALQFRADQKIYHLQTPQSPVVRTKTYTTYSIDENPTGTNAIVAVLAHTGFDMEDAMILN
KSSVERGMCHGQIYQTETIDLSDQNSRYDSGHKSFRRSHADKSVHSSIDADGLPYVGQKI
YPDEPYYSVYDEVTSRIRTTRRKGTDPVIVDFVSVDMKSKKHPQKANIRFRHARNPIIGD
KFSSRHGQKGVCSQLWPDVDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSL
HGKFVDATPFRNAMKKPNGDKESKSSLLVDDLGSMLTEKGFNYYGTEKLYSGLLGVELEC
DIFMGPVYYQRLRHMVSDKFQVRSTGQVDQLTHQPIKGRKRGGGIRFGEMERDSLLAHGA
SYLLHDRLHTSSDHHIADVCSLCGSLLTSSIVNVQQKKLIQVAGKLPPGRTPKKVTCHSC
KTSKGMETVAMPYVFRYLAAELASMNIKMTLQLSEREGATDEDLIPEEEK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgaacgcgaaagactcgacggttcctaatgtcgaagacttcagggagcttcac
aatctcgtcacacatcatatagagtcgttcgattacatgacagataaaggtctcgatgtt
atgttcaatcgaatcaaaccggttactgtctacgattcagactccgacaacaacttgagc
atttggttagagaatcctgtagtattcgctcctcagaaggagagttccagttcaacatca
aggaaagagtctttgtttccctttgaggctaggcaggcgaagatttcgtatacaggaacg
tttatggctgatgtttgctttaagtataatgatgaagttgttgtcagagacaaatttgat
tttgggcaatttcccattatgcttatgtcaaagctttgcagcttaagaggtgctgattgc
cggaaactgttaaagtgtaaagagtcaacttctgaaatgggagggtactttgttttgaat
gggatcgagagagttttccgatgtgttattgcacctaagcgaaaccatccaacaagtatg
atccgaaactcattccgtgatcgtcgggaaggatacagtgacaaggcagttgccattagg
tgtgttagggacgaccagtcatctgtcactgttaaactgtattatcttcgcaatggaagt
gccagagttggattttggataggaggaagggaatatttgcttcctgtcggtcttgttctc
aaggctctcattgaaaccaacgatgaggaaatatataaatgcctgaactgttgctacaat
gagaattatggaagaggcgatggagctattggaacccaactcgttcgtgagagagccaaa
attattcttgatgaagtgcgagacttgggtctttttacccgggaacagtgccggaagcac
ttaggagaacattttcaacctgttcttgatgggttagaaaaagaaaaatatcctactgtt
gctgaagctgtgctcagggattttatatttgttcatcttgacaatgatgacgacaagttc
aatttgctcatcttcataattcagaagctctattctttggtggatcagacttctttacct
gacaatccggattctttgcaaaatcaggaaattttggtcccaggtcaccttataactatt
taccttaaggaaaaacttgaagattggctgcggaagtgcaaaagtcttcttaaagatgag
ttgcataacaagagttcgaaatcaaaattttcctttgaaagccttgctgatgtcaagaag
gttattaacaaaaatcctcccaggagtattggtacgtcaattgaaacattgttgaagaca
ggaagaatgaatacccagtctggtttggatttacagcagagagcaggttacactgttcag
gctgagagattgaactttctccgtttcctttcatttttccgggcggttcatcgaggtgct
tcttttgctggacttcgtacaacaactgtgaggaagctgcttcctgaatcttgggggttt
ctttgccctgttcacactcctgatggggaaccttgtggattactgaatcatatgactcgt
attagccgaatcacttctcagttcgattccaaaggaaacatccgggattttctgaaaata
agaaagtcagttgttgaggttcttgttggggtgggtatggtaccttcattgccaaagcta
gtacgagcggcaccaccagaagtcattcatgttcttttagatggtcaagttgtaggcacg
ctatcttctaacgtagtcacggacgttgtctcctatttgcggagactgaaagtggaggct
ccttcagtgattcctgaagacctcgaagtgggatatgtacctacaagcatgggtggatct
tatcctggattgtatttggcatcatgtcctgcaagattcattaggcctgttaaaaatata
tctataccttctgaaaatattgaacttattggaccgttcgaacaggtttatatggaaata
agctgtcctgatggaggaaatggaggaaggaataactcttgctcagcaactcacgaagaa
attcatccaactgggatgataagtgtggttgctaatcttacaccttggtcagatcataac
caaagtccgcgtaacatgtatcagtgtcagatggcgaaacaaaccatggcatattctact
caagctctccaatttcgtgccgaccagaagatttaccatttgcagactcctcaatcccct
gttgtgcgtaccaaaacatacaccacttacagtattgatgagaatcctacagggactaat
gcaattgttgctgtcctcgctcatacaggatttgatatggaagatgctatgattttgaac
aaatcatctgtggagcggggaatgtgccatgggcaaatataccagacagaaactattgat
ctatcagatcagaatagccgatatgatagtggtcataaaagttttaggaggagtcatgct
gacaaatcagttcattctagtatcgatgctgatgggttaccatatgttgggcagaaaata
tatccagatgagccgtattatagtgtctatgatgaggtaactagcagaataaggaccacg
aggcgaaaaggtaccgaccctgtcatagttgactttgtctctgttgacatgaaaagcaag
aaacatcctcaaaaggcgaatattcgtttccggcatgcaagaaaccccataattggagac
aagttcagtagtagacatgggcaaaagggtgtttgttcccaattgtggcctgatgttgat
atgccgtttaatggagttactggaatgcgtccagatctgatcattaaccctcatgctttc
ccatcaagaatgacaattgctatgcttttggaatctattgctgctaagggaggtagtctg
catggaaagtttgtcgatgcaacgccgtttcgtaatgcaatgaaaaaaccaaatggagat
aaggagagcaagtccagtttgcttgttgatgatctcggttccatgttaactgaaaaaggg
ttcaactactatgggactgagaaattatatagtggacttttaggagtagaactggagtgt
gatatatttatgggtcctgtttactaccaaagattgcgtcacatggtctcagacaaattc
caggttaggtccactggacaagtggatcaactaactcatcagccaatcaagggaaggaaa
cgaggtggagggattcggtttggtgaaatggaaagagactcactacttgctcatggagct
tcctatctattacacgacaggcttcacacttcttcagatcaccacattgcagatgtatgt
tcactgtgtggaagcttgctcacttcgtctattgtgaacgttcaacagaagaagctaatt
caagttgctggaaagttacctcctggtagaactccaaagaaggtaacttgccattcctgt
aagacaagtaaaggcatggagacagttgcaatgccatatgtgttcagatacttggctgca
gagttggcttcaatgaatattaagatgactcttcagttgagcgagagagaaggagcaacc
gatgaagatttaataccagaggaagaaaaataa
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