Camelina sativa (false flax): 104741633
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Entry
104741633 CDS
T05044
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104741633
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104741633
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104741633
NCBI-ProteinID:
XP_010460825
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Position
14:complement(15736562..15738023)
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AA seq
371 aa
AA seq
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MDSLVITISLLFAIFASPLVESAYNHSNGYTLAKVSLNPIDACWRRNPKWATSRQALAHC
AVGYGKAALGGKNGPIYVVTDPSDDPVKPKPGTLRYAVVQPKPLWITFARDMVIVLKSEL
YVNSYKTIDGRGAKVEIGNGPCIRMKLVKHVIIHGISIHDCKPGPKEKLDGDGIRVFQSS
HIWIDHCFLSRSQDGLIDVIFLSTAVTISNNYFTQHDKVMLLGHDDKFMGDKIMRVTIAF
NYFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPIIYSEGNYFVAPDKRSSKQV
TKRMTTGADSKKWKWSTSKDVFMNGAFFVPSGGAVKPLYKGGEAFPVAHGSLVPSLTSSA
GPLRCYAGRIC
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggattctctcgtaataacaatttcacttctctttgcaattttcgcttctcctcttgta
gagtctgcttataatcatagtaatggttacaccctcgcgaaggtatcactaaatccaatt
gatgcttgctggcgaagaaaccctaaatgggcgactagccgtcaagctcttgcacattgc
gcggtagggtacggaaaagctgcgttagggggcaaaaacggtccgatctacgtggttaca
gacccatcagacgaccctgtaaaacctaaacctggaacgctaagatatgcagtggtccaa
ccaaaaccgctatggatcacattcgcacgtgacatggtgatagtgttgaaaagcgagctc
tatgtgaacagctacaagacgatagacgggagaggggcaaaagttgaaataggcaacggg
ccgtgtataaggatgaaacttgtgaaacatgtcattatacatgggataagtatccatgat
tgtaaaccaggtccgaaggaaaaattggatggtgacggtatccgcgttttccaatcttca
catatttggatcgatcattgtttcttgtctcggagccaagatggtttgatcgatgtgatt
tttttgtctacggctgtcactatctctaataactatttcacgcagcatgataaagtgatg
ttactcggacatgatgacaagtttatgggagataagatcatgagagttacaattgcattc
aactattttggaccaggtctcattgagagaatgcctagggtgaggagagggtacgcgcat
gtagcaaacaatagatacgagaaatggcaaatgtatgcgatcggaggaagtgccgatcca
attatctatagtgaaggcaactacttcgttgctcccgacaagcgtagcagtaaacaggtg
acgaagagaatgacaactggagctgattctaaaaaatggaaatggagtacgtctaaagac
gttttcatgaatggagctttcttcgtgccgtctggtggagcagtcaagccgttgtacaaa
ggaggagaggcgtttccggtggcccacggctctctcgtcccttctcttacttcctccgcc
ggtcctctccgttgctacgccggtagaatttgctaa
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