Camelina sativa (false flax): 104741965
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Entry
104741965 CDS
T05044
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03430
Mismatch repair
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104741965
03410 Base excision repair
104741965
03420 Nucleotide excision repair
104741965
03430 Mismatch repair
104741965
03440 Homologous recombination
104741965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104741965
03400 DNA repair and recombination proteins [BR:
csat03400
]
104741965
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104741965
DNA replication proteins [BR:
csat03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
104741965
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
104741965
MMR (mismatch excision repair)
DNA polymerase delta complex
104741965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
DNA_pol_B_2
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
104741965
NCBI-ProteinID:
XP_010461216
UniProt:
A0ABM0VUC1
LinkDB
All DBs
Position
2:27199584..27206978
Genome browser
AA seq
1095 aa
AA seq
DB search
MNRGGGNSKKRPPPSNPPPAIKHRATGNSTPSPAIGTLEDDFMVEEDVFLDEALLYGEDD
EESLILRDIEERESRSSAWARPPLSPAYLSNSQSIIFQQLEIDSIVSETHKELLPGSSGQ
APIIRMFGVTKEGNSVCCFVHGFEPYFYIACPPGMGPDDISQFHQTLEGRMRESNKNAKV
PKFVRRIEMVQKRSIMYYQQQKSQNFLKITVALPTMVASCRGILDRGLQIDGLGMKSFQT
FESNILFVLRFMVDRDIVGGNWIEVPTGKYKKNARTLSYCQLEFHCLYSDLISHAAEGEY
SKMAPFRVLSFDIECAGRKGHFPEAKHDPVIQIANLVTLQGEDHPFVRNVMTLKSCAPIV
GVDVMSFETEREVLLAWRDLIRDVDPDIIIGYNICKFDLPYLIERAATLGIEEFPLLGRV
KNSRVRIRDSTFSSRQQGIRESKETTIEGRFQFDLIQAIHRDHKLSSYSLNSVSAHFLSE
QKEDVHHSIITDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPIS
FLLARGQSIKVLSQLLRKAKQKNMVLPNAKQSGSEQGTYEGATVLEARTGFYEKPIATLD
FASLYPSIMMAYNLCYCTLVTPEDVRKLNLPPEHVTRTPSGDTFVKQSLQKGILPEILEE
LLTARKRAKADLKEAKDPLAKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTS
YGRQMIEQTKKLVEDKFTTLGGYEYNAEVIYGDTDSVMVQFGVSDVETAMNLGREAAEHI
SGTFIKPIKLEFEKVYFPYLLINKKRYAGLLWTNPQQFDKMDTKGIETVRRDNCLLVKNL
VTESLNKILIDRDVPGAAEYVKKTISDLLMNRIDLSLLVITKGLTKAGDDYEVKSAHGEL
AERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLQNNIPIDPNYYLENQIS
KPLLRIFEPVLKNASKELLHGSHTRSISIATPSNSGIMKFAKKQLSCVGCKVPISNGTLC
ASCKGREAELYCKNVSQVADLEEVFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRMKAQ
KDMAVAKQQLERWSF
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaggcggcggcaattccaaaaagcgaccgcctccgtcaaatcccccaccggcg
ataaagcatcgagccaccggtaattcaacaccatctccggccatcggaaccctagaagat
gattttatggtggaagaagacgtgtttcttgacgaggctctcttgtacggcgaagacgac
gaagaatccctaattctccgtgacatcgaggagcgtgaatcgcgttcttccgcttgggct
cgacctccgctctcacctgcttatctctcaaattcgcagagtatcattttccaacaattg
gagattgactctatagtttcggagactcataaggagctgttaccgggttcttcagggcaa
gctccaatcattaggatgtttggggttaccaaagaaggtaacagtgtatgttgctttgtt
catggatttgagccctacttctacattgcttgccctcctggtatgggacctgacgatatt
tctcaattccatcagactctcgagggaaggatgagggaatccaataaaaatgccaaggtc
ccgaagtttgtccgtcgtatagaaatggtgcagaaaagaagcattatgtattaccaacag
caaaaatcccaaaattttctgaagattacagttgcattaccgactatggtagccagctgt
cgcggtatccttgatagaggcttacaaattgatggattgggtatgaagagcttccaaaca
tttgagagcaatattcttttcgttctacgtttcatggttgatcgtgatattgtcggagga
aattggattgaagtacctactgggaaatataagaagaacgcaagaactttgtcatactgc
cagttggagttccattgcctgtactcagatctaatcagtcatgctgcagaaggtgaatac
tcaaaaatggctcccttccgtgtactaagttttgatattgagtgcgcaggtcgtaaagga
cactttcctgaggctaagcatgatcctgtaatccagatagcgaaccttgttactcttcag
ggagaggatcacccatttgtacgcaatgtcatgactcttaagtcatgtgctccaatcgta
ggcgtagatgtcatgtcttttgaaacagaaagagaagtcttgcttgcttggagggatttg
attcgtgatgttgatcctgatatcatcattggttataacatctgcaaattcgatttacct
tacctgattgagagagctgcaacactaggaatagaggaatttcctcttcttggtcgtgta
aagaacagtagggtccggatcagagactcaacattttcatcgagacaacaagggataagg
gaaagtaaagaaaccacaattgaaggaagatttcaatttgacctgattcaggcaatacat
agagaccacaaattaagttcttattcgctgaattctgtctcagctcactttctttccgag
cagaaagaggatgtccatcattctataataactgatctccaaaatgggaatgcggaaacc
aggaggcgtcttgctgtttattgtttgaaggatgcatatctccctcagaggcttctggac
aaactgatgtttatatataattatgtcgaaatggctcgtgtaactggtgtccctatttcc
ttccttcttgctagaggacagagtatcaaggttctatctcagcttcttaggaaagctaaa
cagaaaaatatggttcttccgaatgctaaacagtcagggtccgaacaaggaacttatgaa
ggcgcaactgtcttagaagcaagaacaggtttctatgaaaaaccaattgcaactttggat
tttgcttcactgtacccgtcaattatgatggcatataatctgtgctactgcaccttggtg
acacctgaagatgtacgcaaactgaatcttccacctgaacatgtcactagaactccatca
ggggacacatttgttaagcagagcttgcaaaagggtatacttccagaaattctcgaagag
cttcttactgcccgtaaaagagccaaagcagatttaaaggaggctaaggacccccttgca
aaggctgttttagacggtaggcagttggcattgaagatcagtgcaaattctgtctatggg
tttacgggagccactattgggcagttaccatgcttagaaatatcctcaagtgtaactagc
tatggtcgtcagatgattgaacaaacgaagaaacttgtggaagataaattcacaacacta
ggcgggtatgaatacaatgcagaggtcatttatggagacacggattcagtcatggtgcaa
tttggagtatcggatgtagaaactgcgatgaacttggggagggaagctgcggaacatatt
agcggaacttttatcaaacccatcaaattggagtttgaaaaggtttatttcccctatctg
ctgattaacaagaagaggtatgctggtttgctatggacaaatcctcaacagtttgacaaa
atggacaccaaaggaatcgagacagtacgaagagataattgtttactggttaagaacctc
gtgactgagagtcttaacaaaattcttattgatagagatgttccaggcgcagctgagtat
gttaagaaaaccatttcggatcttctcatgaaccgtattgacttatcacttttggtgatt
acaaagggtctaacgaaagcaggagatgattatgaagttaaatcagctcatggtgaactt
gctgaacgcatgcgtaagagggatgctgctacagcgccaaatgttggggatcgagtgccg
tatgttattataaaagctgctaaaggtgccaaggcttatgaacggtcagaagatcctatc
tacgtgctacaaaataacatccctatagacccaaattactacttggagaatcagattagc
aagccactgcttaggatttttgagccagtcttgaaaaatgctagcaaggaacttctccac
ggaagtcacactaggtcaatatcaattgctactccttcaaacagcggcataatgaaattt
gctaagaaacaactgagctgtgttggctgcaaagttccgatcagcaatggaacactatgc
gcaagttgcaagggaagagaagccgagttgtactgcaaaaacgtgtctcaagtggcggac
ctagaagaagtttttgggaggctgtggacccagtgccaggagtgtcaaggctctctccat
caagatgtcttgtgcaccagtcgagattgtcctatattttaccggagaatgaaagcacaa
aaagacatggctgtggccaagcaacaactcgaacgctggagcttctaa
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