Camelina sativa (false flax): 104742123
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Entry
104742123 CDS
T05044
Name
(RefSeq) polypyrimidine tract-binding protein homolog 3
KO
K14948
polypyrimidine tract-binding protein 2
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104742123
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104742123
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RL
Nup35_RRM_2
TGF_beta
Phage_tail_terminator_5
DUF3587
RRM_10
Motif
Other DBs
NCBI-GeneID:
104742123
NCBI-ProteinID:
XP_010461394
UniProt:
A0ABM0VUS5
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All DBs
Position
14:complement(21531140..21534806)
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AA seq
433 aa
AA seq
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MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVPSAVSALQF
FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV
FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL
QVNYNNDRSRDYTNPNLPAEQKGRSSHPGGYGDVGVAYPQMANTAAIAAAFGGGLPPGIT
GTNDRCTLLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLRNKPDHALVQMGDGFQAELAV
HFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRFNRNAAKNYRYCCSPTKMIHL
STLPQDVTEEEVVNHVQEHGAIVNTKVFEMNGKKQALVQFESEEEAAEALVCKHATSLGG
SIIRISFSQLQTI
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcttccaaagtcattcatgttcgtaatgttggtcatgagatttctgaaaat
gatttgcttcagctttttcaaccatttggggttataactaagcttgtcatgctcagggcc
aagaatcaggctcttctccaaatgcaagatgttccttcagcagtcagtgcccttcagttt
tttactaatgtgcagccaactataagaggtaggaatgtgtatgtccagttctcttctcat
caagagttgacaactatagagcagaatattcatggacgggaagacgagccgaatcgtatt
ctcttagtcactatccatcacatgctgtatccaattactgttgacgtgctgcatcaagtt
ttttctccttatggatttgtcgagaagctcgtcactttccagaagtctgctggctttcaa
gctcttatacagtatcaggtacaacagtgtgctgcctctgctagaactgctctacagggt
cgtaacatctatgatgggtgttgtcagttggatatccagttctcaaatcttgaggagctg
caagtaaattacaacaatgatcgatctagggattatacaaacccaaacctgccagcagag
caaaaaggccgatcatcgcatcctggcggctatggtgatgtaggagtggcatatcctcag
atggcaaacacagccgcaattgcagctgcctttggaggaggcttgcctccgggtataact
ggcacaaatgataggtgtacattgcttgtctccaatctgaatgcggatagtattgatgag
gataagctattcaatctgttttctctttacgggaacattgtaaggattaagcttcttcgg
aacaaacctgaccacgcccttgtccaaatgggtgatggtttccaagctgaacttgcagta
catttcctcaaaggagcgatgctgtttggtaagcggctagaagtaaacttctcgaagcat
ccaaatataacaccaggcacagactcccatgattatgtaaactcgaacctgaaccgcttc
aaccgcaatgctgcaaagaactaccgctattgctgctcccctacaaagatgattcacctg
tcgacacttcctcaagacgtgacagaggaggaagtggtgaaccatgtgcaagaacacggg
gcaatagtgaacacaaaagtgtttgagatgaacgggaaaaagcaagctctggtacagttt
gagagtgaggaggaagctgcggaagcattggtgtgcaagcacgcgacttctctaggcgga
tcaattatcagaatctccttttcccagctacagacgatttag
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