Camelina sativa (false flax): 104742191
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Entry
104742191 CDS
T05044
Name
(RefSeq) pre-mRNA-processing protein 40A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104742191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104742191
Spliceosome [BR:
csat03041
]
Complex A
U1 snRNP components
U1 related factors
104742191
Complex B
104742191
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
104742191
NCBI-ProteinID:
XP_010461464
LinkDB
All DBs
Position
14:22565052..22574844
Genome browser
AA seq
964 aa
AA seq
DB search
MSNNPPPSSGAQFRPMVPGQQGQHFVPAASQPFHPYGHVPPNAQSQPPQFSQPIQQLFPV
RPGQPGHITSSSQAVSVPYIQTNQILTSGSTQQQPNAPPATGFVTSGPPFSSSYTFVPSS
YPQQQPPPSLVQPNSQMHAAGVPPAANAWPVPVNQSTSLVSPVQQTEQQTPVALSTDPGS
LTPQSASDWQEHTSADGRKYYYNKQTKQSSWEKPLELMSPLERADASTVWKEFTTADGKK
YYYNKVTKESKWTIPEDLKLAREQAQLASEKRSLSEAGSTPLSHNVASSSDLAVGTATSV
APSSSSTLPGHSSSPIQAGLAVPVAHPPSVAPVTPTSGAATDTEATAIKADNLPSRGAND
SNNGATTQNNEADNKERSVNGKANLSPAGAKANVEEPMVYATKQEAKAAFKSLLESVNVH
SDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVKM
LEECEELSSSIKWSKAMSLFENDERFKAVDRSRDREDLFDNYIVELERKERNKAQEEHRQ
HMAEYRKFLETCDFIKAGTQWRKVQDRLEDDERFCLEKIDRLIGFEEYILELEKEEEELK
KVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELKELPQYQAVASNTSGS
TPKDLFEDVTEELEKQYHEDKSRVKEAMKSRKISMVSSWLFEDFKSAISEDLSPQPVSDI
NLKLIYDDLVERMKEKEEKEARKLHRMAEEFTNLLRTLKEITAASNWEDTKPLIEESQEY
RSIGDESVSRGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKER
EREKERGKERSKREESDGETAVEASEGHKEEKRKGKDRDRKHRRRHHNSDEDVSSDRDDR
EESKKSSRKHGNDRKKSRKHANSPESDSENRHKRQMKEQREGGRRSGYDELEDGEVGEDG
EIRH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataatcctcccccgtcttctggtgctcagtttcggccgatggttcctgggcaa
cagggtcagcattttgttcctgcagcttcacagccttttcacccctatggacatgtacct
ccaaatgctcagagtcagcctccacagttttctcagcccatacagcagctctttccagtg
agaccaggtcagcctggtcatattacatcatcgtcacaggctgtatcagttccttatatt
caaacaaaccagattctcacttctggatctactcaacaacagccaaatgcacctccagcg
acgggctttgttacatctggacctccattttcttcttcatatacttttgtaccatcttct
tatcctcagcaacaaccaccaccatcattggtccaaccaaattctcagatgcatgcggcc
ggtgtccctccagcagcaaacgcttggcctgttcctgtaaatcaaagtacatcacttgtt
tcccctgtgcagcagactgagcaacaaacaccagtcgcactttccacagacccaggaagc
ttgactccgcaatctgcatctgactggcaggagcatacatctgctgatgggagaaagtat
tattacaataagcagactaaacaatcaagctgggagaaacctcttgaactgatgtcacca
cttgagcgggctgatgcatccactgtatggaaggaatttacaacagctgatggaaagaaa
tattattataacaaggttacaaaggagtctaagtggacaattccagaagatttgaagtta
gctcgggaacaagcccaactagctagtgaaaagaggtccctttccgaagctggatctact
cctctgtcccacaatgttgcatcctcatctgatctagcggttggcactgcgacctctgtt
gctcccagctcatcttcaacacttcctggacattcttcaagccctatccaagcgggtttg
gctgtacctgtcgcccatcctccctcagttgctcctgttactccaacgtctggtgcagct
actgatactgaggctactgcaataaaagcggataatttaccgtctcggggggcaaatgat
tcaaataatggagctacaacacaaaacaatgaggctgacaataaggaaaggtcggtgaat
ggaaaagcaaatctgtcacctgctggtgccaaagcaaatgttgaggaacctatggtatat
gctactaagcaggaggctaaagctgctttcaagtctcttttggaatctgtaaatgttcat
tctgactggacatgggaacagacattgaaagagattgttcacgacaaaaggtatggtgct
ttgaggactctaggtgagcggaaacaagcttttaacgagtatcttggtcaaaggaaaaaa
gtggaagctgaggaaagacgaagaagacagaagaaagctcgggaagaatttgtcaagatg
ctagaggagtgtgaagagctttcgtcatccataaaatggagcaaagcaatgagtttgttt
gaaaatgatgagcgctttaaagctgttgaccgttcaagggatcgtgaagatctttttgac
aattatattgtggaacttgagaggaaggaaagaaataaggcacaggaggagcatcggcaa
catatggcagagtatcggaagtttcttgaaacctgtgactttatcaaagctggtacacaa
tggcgcaaagttcaagatagactggaggatgatgaaagattctgtcttgaaaagatagat
cgcctgattggttttgaggaatacattcttgaactagagaaggaagaagaggagctgaag
aaagtagagaaagaacatgtaaggcgggccgagagaaaaaaccgtgatgcatttcgtaca
ctattggaagaacatgttgctgctggcatccttacagccaagacgtactggttggattat
tgcattgagttaaaggagttgccccaataccaagctgttgcatctaatacgtctggctca
actccgaaagacttgttcgaagatgtcacagaagagttagagaaacagtatcatgaggat
aagagtcgcgtaaaggaagctatgaagtcaaggaagatttccatggtctcctcttggctg
tttgaagattttaaatctgctatttcagaagatctcagtcctcaaccagtatcagacata
aatttaaagcttatatatgatgatttggttgagagaatgaaggaaaaagaagaaaaagag
gccagaaagcttcaccgtatggctgaagaatttaccaatctgttgcgcactctcaaggaa
ataaccgcagcttcaaattgggaagataccaaaccactgattgaagaaagtcaagagtac
agatcgattggagatgaaagtgttagcagagggttatttgaggaatacataacgagttta
caagaaaaggcaaaggaaaaggagcgtaagcgtgatgaggaaaaggttagaaaagagaag
gaaagggatgagaaggagaagcggaaagacaaggataaggagagaagggaaaaggaaagg
gaacgtgaaaaagagaggggaaaagagaggagtaaaagggaagaatcagatggtgagact
gctgtagaagcgagcgaaggtcacaaagaggagaaaagaaagggaaaagatcgagaccga
aaacataggagacggcatcacaattctgatgaagatgtcagttctgatagagatgacaga
gaagagtcaaagaaatcctcccgtaaacatggtaatgatagaaaaaaatcaagaaagcac
gcaaactcgcctgaatctgatagtgaaaaccggcataaaagacagatgaaagaacaaagg
gagggtggtcgtcgaagtggttatgacgagctagaggatggagaggttggggaggatggc
gaaatccgacattaa
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