Camelina sativa (false flax): 104742204
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Entry
104742204 CDS
T05044
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104742204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104742204
Spliceosome [BR:
csat03041
]
Common components
Common spliceosomal components
SR proteins
104742204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_Nup35
RRM_5
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104742204
NCBI-ProteinID:
XP_010461476
UniProt:
A0ABM0VUZ8
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All DBs
Position
2:complement(27303455..27305947)
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AA seq
305 aa
AA seq
DB search
MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA
FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISRGRVVEPPPKSRRSRSRS
PRRSRSPRRSRSPSRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYERRERHQEKDRDH
RRRSRSRSASPDDKRRVRGRYDNESRSHSRSLSASPARRSLSPRSSSPQKASPSREVSPD
KRSYERSPSPRRSLSPRSPSLQKASPSKEISPERRSNERSPSPGSPSPRGKAAAASRSQS
PYAAE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaaggtcaggtccaccggatatcagtgacacatactcactcctcgtc
cttaacatcaccttccgtacgactgcggatgatctctatcctctattcgcaaagtatggc
aaggtcgttgatgtctttatccccagagatcgaaggactggtgattctcgtggttttgcg
tttgttcggtacaagtataaagatgaagctcacaaagcagtggaaaggcttgatggaaga
gttgttgatggccgggaaataactgttcagtttgctaaatatggccctaatgctgagaag
atttccagaggaagagttgtggaaccaccaccaaagtcacgaaggtcaaggagccgtagt
cctaggaggagtcgtagtcctcggaggagccgtagtccgtctagacgccgtagtcctaga
agaagccgcagtcctcggaggaggtccagagatgattatagggaaaaagactaccggaag
aggagcaggagccgaagctatgagaggcgtgaaaggcatcaggagaaggatagagatcat
cgtcggcgcagtaggtctcgtagtgccagcccagatgacaaacgcagagtcagaggccgt
tatgataatgagagccgcagtcacagtcgctccttgagtgcatctcctgctcgccgcagc
ctcagccctagaagttcctccccacaaaaagcctctccttctagagaagtttctcctgat
aagcgtagctatgagaggtctccatctcctcgtcgcagcctcagcccaagaagcccttct
ttgcaaaaggcctctccttctaaggagatttctcctgaaaggcgtagcaatgagaggtcc
ccatctcctggtagcccttctccccggggcaaagctgctgctgcttctcgaagccaatct
ccttatgctgcggaatga
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