Camelina sativa (false flax): 104742217
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Entry
104742217 CDS
T05044
Name
(RefSeq) THO complex subunit 5A
KO
K13174
THO complex subunit 5
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104742217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104742217
03041 Spliceosome [BR:
csat03041
]
104742217
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
104742217
Spliceosome [BR:
csat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
104742217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
104742217
NCBI-ProteinID:
XP_010461493
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All DBs
Position
14:22854671..22856553
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AA seq
452 aa
AA seq
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MQSEMANNTAEKSPVELLQETKAYIEAIVEKMLSIKQQGNPKTENRELLTQMFLNFINLR
QANRAILVEEEKAKTETDLAKSPVDFTTLELHNLMYEKSHYLKANKASRDFKSRYPNIDL
ISEQEFFSEAPEAIKSQTLSNDTFHDLMLKRLNFELHQRKELCKLRARLEQHKKSLLESN
AERNKFLSSLPVHLKSLKKASLPVQSQLSLPNPKKLKCHNLAELLPPPLYVIYSQFMARK
EAFEENIDLEVSGSLKDAQTYARQQAEQNSESLRLEDNGEDDDGKRQRKRSKKEGSDEGG
LYQIHPLKVVLHVYDVEIPDPKSNRPVVLKFEYLLKLNVVCVGIEESQDELEKSILCNLF
PEDAGLEPPHQSAKLILGDDHLFDESRTSRPYKWAQHLAGIEILPEMSPLFTDKDTQTSD
TAIDYASASDHRNVQTVLQRIRSQKKAKLTLV
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcggagatggcgaacaacacggcggagaaatcaccggtagagctacttcaagag
accaaagcctacatcgaggccatcgtcgagaagatgctctcaatcaagcaacaaggaaac
cccaaaaccgagaatcgagaactcctcactcagatgtttctcaatttcatcaatctgcga
caagcgaatcgcgcgattcttgtagaggaagagaaagcgaaaactgagacggatttagca
aaatctccggtggatttcacgacgttggagcttcacaatctcatgtatgagaagagtcat
tacctcaaagctaataaagctagcagagatttcaaatctaggtatcccaacatcgatctc
atatctgaacaagagttcttcagtgaagctcctgaagcaatcaagtctcaaactctttca
aatgatacttttcatgatttgatgcttaaaagactcaattttgagcttcatcagaggaaa
gaactatgcaagcttagagcgaggttggaacaacataagaagagtttgctggaaagtaat
gcagagcgtaacaagtttctgtcaagtcttccagtgcatctcaaatctttaaagaaagca
tctttgccagtacagagccaactgagtttgccgaatccaaagaagctgaagtgtcataat
ttagctgagcttcttcctccgccgctttatgttatatattcgcagttcatggcacgaaag
gaagcttttgaagagaatatagatctcgaggtatctgggagccttaaggatgctcaaact
tatgcccgccagcaggcagaacagaactcagagagtctaagattggaggataatggtgaa
gatgatgatggaaaaaggcaaaggaaacgatccaagaaagagggttctgacgagggagga
ctatatcaaattcatcctcttaaagttgtccttcacgtatatgatgttgagattccagat
ccgaaatccaatagacctgtcgtgctcaagtttgagtacttgttgaagttgaacgttgta
tgtgttggcattgaagagtctcaggatgaacttgagaaaagtatactatgtaacttattt
ccagaagatgcaggtcttgagcctcctcatcagtcagcaaagctcattcttggcgatgat
catttatttgatgagagcagaacttcgaggccatataagtgggcacaacatttggcgggg
attgagattttacctgagatgtcaccattgtttactgacaaggatactcaaactagtgat
acagctatagactatgcttctgcgtctgatcaccgcaatgtgcaaaccgttctgcaaaga
atacggtcccagaaaaaggctaagctaactcttgtctga
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