Camelina sativa (false flax): 104742311
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Entry
104742311 CDS
T05044
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
104742311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104742311
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
104742311
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
DUF5041
Motif
Other DBs
NCBI-GeneID:
104742311
NCBI-ProteinID:
XP_010461606
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All DBs
Position
14:24130479..24134221
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AA seq
681 aa
AA seq
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MARNREGLVLLIDVGPAMHSVLPDVEKACSLLLQKKLIYNKYDEVGIVVFGTEETGNELA
REIGGYEHVTVLRNIRVVDEVVAEHVKQLPRGTVAGDFLDAVIVGMDMLIKMYSGGQKGK
KRMCLITNAACPTKDPFEGTKDDQVSTIATKMAAEGIKMESIVMRSNLIGDAHEKVIEEN
DHLLNLFSSNAIAKTVNVESPLSLLGSLKTRRVAPVTLFRGDLEINPTMKIKVWVYKKVA
EERLPTLQLYSDKAPPTDKFAKHEVKIDYDYKVTAESTQVIAPEERVKGFRYGPQVIPIS
PDEIETLKFKTDKGMKLLGFTEASNILRHYYMKDVNIVVPDPNKEKSVLAVSAIAREMKE
TNKVAIVRCVWRNGQGNVVVGVLTPNVSEREDTPDSFYFNVLPFAEDVREFPFPSFNKLP
ASWKPDEQQQAVADNLVKMLDLAPSAKEEVLLPDLTPNPVLQRFYEYLELKSKFTDAALP
PMDETFKRIMEQDPELSSNNKSIMDAFRGSFEVKENPKLKKASKRLLRDKPSGSDDEDNR
MITYDANENKIDIVGDTNPIQDFEAMISRRDNHDWATKAITQMKNRIVKLVENCTDEGDK
ALECVLALRKGCVLEQEPKQFNEFLNHLFELCQERKLPHFLKHFTSKKITLIPKSEAPDS
DVVDENAGDYFTVKQEPMLES
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaatcgggaagggttagttttgttgatcgatgttggtccagcgatgcatagt
gttctccctgatgttgaaaaggcatgttctttgctactacagaagaagttgatttacaac
aagtatgatgaagttggaattgttgtatttggaactgaagaaactggaaacgagcttgct
agggaaataggtggatatgagcatgttacggttttaaggaatataagagttgttgatgaa
gtcgtggctgagcatgtaaagcagctacctcgaggaaccgtagctggcgactttcttgat
gctgtgattgttgggatggatatgcttataaagatgtatagtggtgggcaaaaggggaaa
aaacggatgtgtctcatcacgaatgctgcttgtcctaccaaagatccatttgaagggacg
aaagatgatcaagtcagcactatcgctacgaaaatggctgcagagggtataaagatggaa
agcattgtcatgaggtccaatttaattggtgatgctcatgagaaagtgattgaggagaat
gatcatttgttgaatttgttctccagcaacgccattgcaaaaacagtgaatgttgagagt
ccactctcactgctaggttccttaaagacccgaagggttgctccagttactttgttcagg
ggcgaccttgaaattaacccaacaatgaagattaaggtgtgggtttataagaaagtggct
gaagagagacttcccactctacaattgtattctgacaaagcgcctccaactgacaagttt
gcgaaacatgaagtgaaaattgattatgattacaaagttactgcagaatctactcaggtt
attgctccagaagaaagggtcaagggctttcgctatggacctcaagttattcctatatca
ccagatgagatagaaacactcaagttcaaaactgacaaaggcatgaagcttttgggattt
actgaggcatcaaacatactgcgacattattatatgaaagacgtgaatatagttgttcct
gacccgaacaaagaaaaatctgttcttgcggtctcagccattgcaagagaaatgaaggaa
acaaacaaggtagcaattgtacgttgtgtctggagaaatggacaaggcaatgtggttgtt
ggcgtcctgactccaaatgtttctgaaagagaagacacccctgattcattttacttcaat
gtgctacctttcgccgaagatgtccgcgagtttccatttccttctttcaacaaacttccg
gcatcatggaagccagatgaacaacagcaagcagtagcagataatttggttaagatgctt
gaccttgcaccttctgctaaagaggaagtactactgcctgatcttactcctaacccggtt
ttgcagcggttttatgaataccttgagctgaaatcaaaattcacggatgctgctttacct
ccaatggatgaaacattcaagagaattatggagcaggatcctgaactctcttccaacaat
aaatccataatggatgcctttcgtggaagttttgaagtcaaggagaatccgaagttgaag
aaggcttctaagagattgttacgggataaaccatcgggttcagatgatgaagacaatcgc
atgattacttatgatgccaatgagaacaaaattgatatagtcggagatacaaacccaatt
caagattttgaagccatgatatcccgcagagataaccatgattgggccactaaagcaatc
acacaaatgaaaaaccgaatagtgaagctcgtcgaaaattgtactgatgagggtgacaaa
gcattggaatgtgtgctcgctcttcgtaaaggctgcgtcttggagcaggaaccaaagcaa
ttcaatgagtttttgaaccatctgttcgagttatgccaagaaagaaaactaccacatttt
ctcaaacatttcacgtcaaagaagatcacattgattcccaaatccgaagcgccagacagt
gatgtggtagacgagaacgcaggggattatttcaccgttaaacaagagccaatgctggag
agctaa
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