Camelina sativa (false flax): 104742584
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Entry
104742584 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC104742584
KO
K16329
pseudouridylate synthase [EC:
4.2.1.70
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00240
Pyrimidine metabolism
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
104742584
Enzymes [BR:
csat01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.70 pseudouridylate synthase
104742584
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Gene cluster
GFIT
Motif
Pfam:
Indigoidine_A
DUF6750
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-GeneID:
104742584
NCBI-ProteinID:
XP_010461907
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Position
14:27059478..27062660
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AA seq
331 aa
AA seq
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MASSSSAQSRISNLQNHLSPLEANTKLRSLVKISPQVSEALSNGRAVVALESTIISHGMP
YPQNLQTAKQVESIVRENGAIPATIAILNGVPCIGLNEEELERLASLGKNVQKTAGRDIP
HVVATRGNGATTVSATLFFASMVGIQVFVTGGIGGVHRHANHTMDISSDLTALGRTPIAV
ISAGVKSILDIPKTLEYLETQEVFVAAYKSDEFPAFFTEKSGCKAPSRVXSPEECARVID
ANMKLNRQAGILFAVPIPKQHSAAGNLIESATQRALTEAREQNVTGNAETPFLLARVNEL
TGGTSLAANIVLVKNNALIGSQIAVALSQLM
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcttcgtctgctcaatcaagaatctcgaatctccagaatcatctttcacct
cttgaggcaaacaccaagctcaggagtctggttaagatatctccacaagtatctgaagcc
ttatccaatgggcgcgctgtggtcgcacttgagtcaaccataatctcccatgggatgcct
taccctcaaaatctgcaaacagcaaaacaggtggagtcaattgtgagagaaaatggagct
atccctgcaactatagctatcctgaatggagtaccttgcataggtctgaacgaagaagaa
ttagaacgtcttgcatctctgggaaaaaatgtccaaaagacagcaggcagagacatacca
catgttgtggctacaagaggaaacggtgcaactacagtctctgcaacgttgtttttcgct
tctatggttggcatccaagtttttgtgacgggcgggataggaggtgtgcataggcatgct
aaccatactatggacatatcatctgatcttactgcacttggaagaacccctatagcagtg
atatcagcaggcgttaaatcaatacttgatattccaaagactcttgaatatttggaaact
caagaggtgtttgttgctgcatacaagagcgatgagtttccagcatttttcacagaaaaa
agcggctgtaaggcaccttcccgtgtgnatagccctgaagaatgtgctcgagtaatagat
gcaaacatgaagctgaaccgtcaggcagggattctatttgctgttccaattccgaaacag
cattcagccgccggaaatcttatcgaatcagcaacacagcgtgctcttactgaagcaagg
gaacaaaacgttactggaaatgcagaaactccgttcttacttgcacgggttaatgaatta
actggaggcacttcacttgccgcaaacattgtgcttgtgaaaaacaatgcccttattggt
tcacagattgcagtagccctttctcagctgatgtga
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