Camelina sativa (false flax): 104742987
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Entry
104742987 CDS
T05044
Name
(RefSeq) chaperonin 60 subunit beta 1, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104742987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104742987
03110 Chaperones and folding catalysts [BR:
csat03110
]
104742987
03029 Mitochondrial biogenesis [BR:
csat03029
]
104742987
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104742987
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104742987
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104742987
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104742987
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104742987
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104742987
Exosomal proteins of other body fluids (saliva and urine)
104742987
Exosomal proteins of breast cancer cells
104742987
Exosomal proteins of colorectal cancer cells
104742987
Exosomal proteins of bladder cancer cells
104742987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
104742987
NCBI-ProteinID:
XP_010462399
UniProt:
A0ABM0VX80
LinkDB
All DBs
Position
14:complement(30866112..30869697)
Genome browser
AA seq
600 aa
AA seq
DB search
MASTFTATSSIGSMVAPNGHKSDKKLISKLSSSSFGRRQSVCPRPRRSSSAIVCAAKELH
FNKDGTTIRRLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDP
VENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAK
ALVTELQKMSKEVEDSELADVAAVSAGNNEEIGNMIAEAMSKVGRKGVVTLEEGKSAENN
LYVVEGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYP
ILIIAEDIEQEALATLVVNKLRGTLKIAALRAPGFGERKSQYLDDIAILTGATVIREEVG
LSLDKAGKEVLGNASKVVLTKETSTIVGDGSTQDAVLKRVTQIKNLIEQAEQDYEKEKLN
ERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKV
DAIKATLDNDEEKVGADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNVKFGYNAATG
KYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIKEPEPVPVGNPMDNSGYGY
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacattcactgccacgtcttccattggttccatggttgctccaaatggtcac
aaatcggataagaaacttatcagcaagttgtcttcaagctcatttggaaggagacaaagt
gtgtgtcctagacccaggagatccagttctgctattgtatgtgcagccaaggaattgcat
ttcaacaaagatgggactaccataaggagacttcaagctggtgtcaacaagcttgcagac
cttgtcggtgttacacttggacccaaaggacgaaatgttgttcttgagagcaagtatgga
tcaccaagaattgttaatgatggtgtgactgttgcaagagaggttgagctggaagacccg
gttgagaacattggcgctaagcttgtgaggcaagcagctgccaaaaccaatgacttggct
ggtgatggtacaacaacatctgttgttcttgcacaaggttttattgctgagggtgtcaag
gtggtagctgctggtgcaaaccctgttttgatcaccagaggtattgagaagacagcaaaa
gctttggttaccgagctccagaaaatgtctaaggaggttgaagacagtgaacttgcagat
gttgcagctgttagtgcgggtaacaacgaagaaattggaaatatgattgctgaagcaatg
agcaaagtaggcaggaaaggtgtggtgacccttgaggagggtaaaagtgccgagaacaac
ctctacgtcgttgaaggaatgcaatttgatcgtggttacatctccccttactttgtgacg
gacagcgagaaaatgtccgtcgagttcgacaattgcaagttacttctcgttgacaaaaaa
attaccaacgcaagggatcttgttggtgttttggaggacgcaattagaggcggataccca
atattgataattgcagaagacattgaacaagaagctttagcgactcttgttgtaaacaag
cttagaggtacattgaagattgcagctctcagagctccaggatttggagagcgcaagagc
caataccttgatgatattgccattctaactggagcaactgtgatccgagaggaagttggt
ctttcacttgacaaagctggaaaagaagttcttggtaatgcctcaaaggtcgtcctcaca
aaggagacttctaccatagtgggtgatgggagcacacaggatgcagtgctaaagcgtgtt
acgcagattaaaaatcttattgagcaagcggagcaagattatgagaaggagaagctgaat
gagagaattgcaaagctctctggtggagttgctgtgattcaggttggagcacaaactgag
acagaactcaaagagaagaagttgagagttgaagatgctcttaatgcaacaaaggccgct
gtcgaggaaggtattgttgttggtggtggttgcactctgcttcgtcttgcttccaaggtc
gatgccattaaggccactcttgacaatgatgaagaaaaggttggagctgatattgttaaa
agagcactgagttatcccctaaaactgatcgccaagaatgctggtgttaatggaagcgta
gttagcgagaaggtgctttcgaacgataatgttaaattcggttacaatgctgcaaccggc
aagtacgaggatttaatggctgcaggaatcattgatccaacaaaggttgtgagatgttgc
ttggaacacgcagcttcggttgcaaagactttcttgatgtcggactgtgttgttgttgag
atcaaggaacctgaaccagttcccgttggcaacccaatggacaactcaggatatggatac
tga
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