Camelina sativa (false flax): 104743102
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Entry
104743102 CDS
T05044
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 10 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
csat
Camelina sativa (false flax)
Pathway
csat04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
104743102
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csat04040
]
104743102
Ion channels [BR:
csat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
104743102
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
104743102
NCBI-ProteinID:
XP_010462522
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Position
14:326862..336479
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AA seq
723 aa
AA seq
DB search
MMAFSHDNRVRFKDEERSIASEYGYGRKARPSLDRVLKNVKWGIEKGSGNFKIFKKPLSS
LPHKDPDHNKVQKETSGTTKKNIINPQDSFLQNWNKIFLFACVLALAIDPLFFYIPIVDG
TRHCLTMDSKLEIAASFLRTLIDAFYIIHIVFQFRTAYIAPSSRVFGRGELVDDAKAIAL
KYLSSYFIIDVLSILPLPQIVVLAVIPSVKEPDSLLTKDYLMSVIIVQYVPRILRLYPLY
TEVTRTSGIVTETAWAGAAWNLSLYMLASHVFGALWYLISVEREDRCWQEACEKKNGCSL
SSLYCHGNGNAANDYLTTSCPFLDPGDITNSTIFNFGIFTDALKSGVVESHDFWKKFFYC
FWWGLRNLSALGQNLQTSKFVGEIVFAISICISGLVLFALLIGNMQKYLESTTVREEEMR
VRKRDAEQWMSHRMLPEDLRKRIRRYEQYRWQETRGVEEENLLRNLPKDLRRDIKRHLCL
DLLKKVPLFEIMDEQLLDAVCDRLKPVLYTENSYVIREGDPVGEMMFVMRGRLISATTNG
GRTGVFNAVDLKASDFCGEDLLPWALDPQSSSHFPISTRTVQALTEVEAFALMAEDLKSV
ASQFRRLHSKQLQHTFRFYSVQWRTWSVSFIQAAWRRYCRKKLAKSLRDEEERLRDALAR
EGDGATASSSLSLGAALYASRFASNALHNLRHNYSNLPPRYTLPLLPQKPTEPDFTASHT
TDP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatggcattcagccatgataatcgtgtcaggtttaaagatgaagagaggtcaatagcc
tctgagtatggttacggaagaaaagctagaccttctttagacagagttctgaagaatgta
aagtggggaattgagaaaggttcaggaaatttcaaaatattcaagaagccattaagttct
cttccacataaggatcctgaccacaacaaggtccagaaggaaacatctggtaccactaag
aagaacatcattaacccacaagattcgtttttgcagaactggaacaaaatatttctcttt
gcttgtgttcttgctttggcgattgatccgctgtttttctacattcccattgtcgatggc
acgaggcactgtcttactatggactcaaagttggagatagctgcgagttttcttcgtaca
ctcatcgatgccttttacattattcacattgtgtttcagttcaggacagcttacatcgct
ccttcttctagagtttttggcagaggtgaactggtggatgatgctaaggcaatagccttg
aagtatctctcatcttacttcatcattgatgtactttctatccttcctctcccacagata
gtggtcttagctgttattccaagcgtcaaagagcctgactctttgctcacaaaagactac
cttatgtctgtcataatcgttcaatatgttcctcggattctccgtttgtatccgctttac
acggaggtgaccagaacatctggcattgttactgaaacagcatgggctggagctgcttgg
aacctctctctctatatgttagccagtcatgtatttggagctttatggtacttaatctca
gtagaacgagaagacagatgctggcaagaggcgtgcgagaaaaaaaacggttgtagttta
agttctctgtactgtcacggtaatggtaatgctgcaaacgattacctgaccacctcttgc
ccttttctcgaccctggtgatataacgaactcaaccatcttcaactttggcatcttcact
gatgctcttaagagtggggttgttgaatcacatgatttctggaagaaatttttctactgc
ttttggtggggactgcgaaatctaagtgcattgggacaaaaccttcaaacaagcaaattc
gttggtgaaatcgtctttgctatatcaatctgcatatctggactagtcttatttgcgcta
cttatcggcaatatgcagaaatacttggaatcaacaacagttcgagaggaagaaatgagg
gtgagaaagagagatgcagagcagtggatgtctcatagaatgttacctgaagacctgaga
aaacgtatcagaagatatgaacaatatagatggcaagagacaagaggagttgaagaagaa
aaccttcttcgtaacctccctaaagacctaagaagagatattaaacgccatctttgcctc
gatcttctcaagaaagtgcctttgtttgagataatggatgaacaattacttgacgcggtt
tgcgataggctaaaacctgtgctctacacagagaacagttacgtgatccgtgaaggagat
cctgtaggggagatgatgttcgtgatgagaggaaggcttataagtgctaccactaatgga
ggaagaactggggtcttcaatgccgtggacctcaaggcaagtgatttctgcggagaagat
cttcttccctgggcattagacccacaatcttcttctcactttcccatctcgacgagaaca
gttcaagctctcaccgaagttgaagcctttgctctaatggctgaggatctcaagtctgtc
gcttcacagttcagacgcctccatagcaagcagctccaacatactttcaggttttattcg
gtgcaatggagaacatggagcgtatcttttatacaagcagcgtggcggagatactgtcgg
aagaagttagccaaatcattacgcgatgaagaagagcgtctccgagacgcgctggctaga
gaaggcgatggtgcaacggcgtcttcgtccttgagccttggagccgctctttacgcgtcg
cgtttcgcgtcaaacgcgcttcataatctgaggcacaattattccaaccttcctcctcgc
tacactcttcctttgttacctcaaaaacccaccgaacctgacttcaccgccagtcataca
actgacccttga
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