Camelina sativa (false flax): 104743311
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Entry
104743311 CDS
T05044
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104743311
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104743311
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104743311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
104743311
NCBI-ProteinID:
XP_010462709
UniProt:
A0ABM0VXU2
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All DBs
Position
14:complement(7108325..7116579)
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AA seq
1427 aa
AA seq
DB search
MSQDEEIAMRDVTSAGLYDWPPLIEVGETWELPSVLIERYNTAGGEGTALCGIFPEIRRA
WASVDNSLFLWRFDKRDGQCPEYSGEEQAICAVGLAKCRPGVFVEAIQYLLVLATPVELV
LVGVCCTEGPDGRDPFAEISVQPLPDYTISSDGVTMTCVTCTNKGRIFIAGRDGHIYELL
YTTGSGWNKRCRKVCLTAGVGSVISRWVVPNVFKFGAVDPVVEMVVDNERQILYARTEEM
KLQAYVFGPNGEGPLKKVAEEKNLLNQKDVSQGNRQAAVAGRSNKPSIVSISPLSMLESK
WLHLVAALSDGRRMYLSTSSSGSGSSISFSGFNNHRQTPNCLKVVSTRPSPPLGVGVGLG
FGAASIAGRTQNEDLSMKVETAYYSVGTLVLSDSSPPTMSSLLVVSRDSSVQSQVGSSSG
PSSRSSRALREVVSSLPIEGRMLFVVDVFPSPDTAATVQSLYSELEYCGLEVSGESYEKA
CGKLWARGDLSTQHILPRRKIVVFTTMGMMELVFNRPVDILRRLLESNSPRSLLEDFFTR
FGAGEAAAMCLMLAARIINFENLISNIVADKAAEAFEDPRIVGMPQFDGTSGLSNTRTAT
GGFSMGQVVQEAEPIFSGAYEGLCLCTSRLLFPLWELSVMSKKISSDTMSEEGVVICRLS
TSAMHVLESKVRSLEKFLRSRRNQRRGLYGCVAGLGDVTGSILYGTGSELGATERNMVRN
LFGAYSNGGESANKRQRLPYSPAELAAREVRAMECIRQLLLRSAEALFLLQLLSQHHVAR
LVQGFDAYLKQALVQLTFHQLVCSEEGDQIATRLISAVMEYYTGSDGRGTVDDISGRLRE
GCPSYFKESDYKFFLAVERLERAAVTSDSEEKENVAREAFSFLSKIPGSADLRTVCKRFE
ELRFYEAVVCLPLQKAQALDPAGDAFNDQLDASIREHALAQRKQCYEIIANSLRSLASSM
LDEASRRQYICQIVHLGVQSTDRAFREYLYKAMIELGLENELLEYGGPDLVPFLQIAGSH
SASQVGAVSTGSSPLGHSGTQISSNQAKYFDLLAKYYVSKRQHVLAAHVLLRLAERRAII
SSGDNPTLEQRREYLSHAVLQAKNASNSDGLVGSSQGASDNGLLDLLEGKLAVVQFQIKI
RDELEAIASNSESSAAMQNSDQNGTVLDGDSSDDSSLANAANEKAMELSSELKSVTQLYN
EYAVPFELWEICLEMLYFANYSGDSDSSIIRETWARLIDKALSQGGIAEACAVLKRVGSH
VYPGDGVVLPLDVLCLHLEKAALERSERVGDVGDEDIARALLAACKGAAEPVLNAYDRLL
SNAAIVPSPNLRIRLLSSVLVVLLEWAMSVLSDRMGSSPTSSSLILGGSFALENKAVSNQ
GVRDKIANAANRYMTEVRRLALPPNRTELVYARFKDLDESLLTPFSF
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagacgaagagattgcgatgcgtgatgtgacaagcgcgggtctttatgattgg
ccgcctttgattgaggttggtgagacttgggaattgccttctgtacttattgagaggtat
aatactgctgggggagaagggactgctttgtgtgggatttttccggagatccgacgagct
tgggcatctgtagacaattctttatttctgtggcgttttgacaaaagggatgggcaatgt
cctgagtatagcggggaggagcaggctatttgtgcggttggtctagcgaaatgtagacct
ggagtctttgttgaagctattcaatatcttttggtgctggcaactcctgttgagttggtt
cttgttggagtgtgctgcactgaagggcctgatggtagagatccttttgctgaaatttca
gtacagcctctacctgactatacaatttcatcagatggagtgacaatgacatgcgttaca
tgtaccaataaagggcgcattttcattgctggacgtgatggtcacatctatgaactgcta
tatacaactggctcaggctggaataaacgttgtcgtaaagtgtgccttactgcaggcgta
ggtagtgtgatctcaaggtgggttgtgccaaatgtgttcaagtttggagctgtagatcct
gtcgtagagatggttgtggataacgaaaggcaaattttatatgcccgcactgaagagatg
aaacttcaagcatatgtttttgggccaaatggggaaggtcctcttaagaaggtggcagaa
gaaaagaatctactaaatcagaaggatgtgagccaaggaaatcgtcaggcagcagtggca
ggtcgatctaacaagccctccatagtcagcatttcgccattgtccatgctggagtcaaaa
tggttgcaccttgttgcagcattatcagatggcaggaggatgtatctttccacctcctca
agtggaagtggtagcagtattagctttagtgggtttaacaaccaccgtcagactccaaac
tgtctgaaagtggtttcaaccaggccatctcctccattgggagtcggtgttggtcttggt
tttggagctgcatctatcgctggtagaactcagaacgaagacctctctatgaaagttgaa
actgcctactattctgttggaactcttgtcctttcagattcgtcgccacctactatgtct
tctcttcttgttgttagcagagattcaagcgttcagtctcaggttggtagcagttcaggg
ccaagttcaaggagttctcgggctttacgagaagttgtgtcttcccttcctattgaaggc
cgtatgctttttgtagtagatgttttcccctctcctgatactgccgctactgttcaatct
ttatattcagaactagaatactgtggactcgaagtctcaggagagtcttatgaaaaagca
tgtggaaaactctgggccagaggtgatctttcgacccagcatatattgccaaggagaaag
attgtcgtttttaccaccatgggtatgatggaactcgtttttaataggcctgtggatatc
ttaaggagacttctagaatccaattctccaaggtcccttctagaagattttttcacccgc
tttggagcaggtgaagcggctgccatgtgcttgatgttggctgcccgaataataaatttt
gaaaatttaattagtaacattgttgctgacaaggcagctgaggcgtttgaggatccgaga
attgtaggaatgccacagtttgatggcactagtggattgtcaaacactagaacagcaact
ggaggtttcagcatgggccaagttgttcaagaagcggagcccattttctcaggtgcttat
gaagggctctgcctttgtacatcaagattactgtttcccctatgggaactttctgtgatg
tctaagaaaatcagttctgacaccatgtctgaggaaggagttgtgatctgtcgtctttct
accagtgctatgcatgttctggaaagcaaggttcgatcattggagaaattcttgagatct
agaagaaaccagagaagggggctttatggatgtgttgctggtttaggagatgtaactggc
tctattttgtatggtactggttcagagttgggagctactgagaggaatatggttaggaac
ttgtttggagcatattccaacggaggtgagtcagcaaataaaagacagcggttgccgtat
agtcctgctgaattggctgccagagaggtgagggctatggagtgtatcaggcagttgctt
ctcagatctgcagaagcccttttcctactccaacttctttctcaacatcatgttgctaga
ttagttcaggggtttgacgcatatctaaagcaagctttagttcagttgacattccatcag
ctagtttgttctgaagagggtgaccaaattgcaacaaggctcatatctgccgtgatggag
tattatactggctcagatggcaggggaacagttgacgatataagcgggcgactacgtgaa
ggttgcccaagttacttcaaggagtctgattacaaattcttcttagctgttgaacgtctt
gagagagctgctgtaacttcagatagtgaagagaaggagaatgttgctagagaggcgttc
agtttcttgagcaaaatcccgggatctgcagatctccgaactgtctgcaaacgttttgag
gaattgaggttctatgaagctgttgtctgcttgcctttgcagaaggcccaagctcttgat
cctgctggcgatgctttcaatgaccaacttgatgcttccataagagagcatgctcttgcc
cagcggaaacaatgctatgagattattgccaactccttgcgatctttagctagttccatg
ctagacgaggcttcacgtagacaatatatatgccagattgttcatcttggtgtgcaatca
actgacagagcgttccgggagtacctatacaaggccatgatagaactgggtcttgaaaac
gagctcctggagtatggaggtccggatttggtaccttttctccagattgctggcagtcat
tctgcatcacaggttggggctgtgtctactggttcatctccgctgggtcactcaggaaca
cagatttcatcaaatcaagcaaaatactttgatcttcttgcgaaatactatgtgtcaaag
agacagcatgtgcttgctgctcacgtacttctaaggcttgcagagagacgtgctattatt
agttcaggggacaatcctacacttgaacaaaggcgagaatacctaagccacgcagtttta
caggccaagaatgcaagtaatagtgatggtttagtaggttcttctcaaggtgcttctgac
aatgggttgcttgatctgcttgaaggaaaactcgcagttgttcagttccaaattaagatc
agagacgaacttgaagctatagcttccaattcggagtcctcggctgccatgcagaactct
gaccagaacgggacagtacttgatggtgattctagtgatgattccagcttagcaaatgca
gcaaatgaaaaggccatggagctctcctcggaacttaaaagcgtaacacagttgtataat
gaatatgctgtcccatttgagctctgggagatctgtctggaaatgctctactttgccaac
tattctggtgattctgattcaagcataataagggaaacatgggctagacttattgacaaa
gctctttcacaaggtgggatagctgaagcctgtgcagttctcaagagagtcggatctcat
gtataccctggcgatggagttgttttacccctcgatgttttgtgccttcacctcgagaaa
gctgcacttgagagatcagagagggttggggatgttggggatgaagacatagctcgagct
cttctggccgcttgcaaaggcgcagctgaacctgtgcttaacgcttatgaccgtttgcta
tccaatgcagccattgtgccatcaccaaatctaaggatccgcctccttagttcggttcta
gtggtgctccttgaatgggcaatgtctgtattgtcagacagaatggggtcgagtccaacc
agctcttctctcatactaggcggatcatttgctctagagaacaaagctgttagtaatcaa
ggggtccgtgataagatcgcaaacgctgcaaacaggtatatgacagaggttaggagactg
gctctgccaccgaacaggacggagttagtatacgcacgtttcaaagaccttgacgagtct
ctcttaactccattctccttctga
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