Camelina sativa (false flax): 104743361
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Entry
104743361 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104743361
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104743361
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104743361
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104743361
03036 Chromosome and associated proteins [BR:
csat03036
]
104743361
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104743361
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104743361
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104743361
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
104743361
NCBI-ProteinID:
XP_010462759
UniProt:
A0ABM0VXW8
LinkDB
All DBs
Position
14
Genome browser
AA seq
476 aa
AA seq
DB search
FLFAQFSSAVDIISAIEFDKSGDHLATGDRGGRVVLFERTDTRDHGGSRRDLEQTDYAVR
HPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQPANGALFLLSTNDKTIKYWKVQEK
KIKKISEMNIDPSKAESSSSPPQLVANGLPADKAHGYLSNDFSFPPGGIPSLRLPVVTSQ
ETNLVARCRRVYAHAHDYHINSISNSSDGETFISADDLRVNLWNLEISNQSFNIVDVKPT
NMEDLTEVITSAEFHPIHCNMLAYSSSKGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSF
FTEIIASISDIKFSKDGRYILSRDYMTLKLWDINMDSGPVASYQVHEHLRPRLCDLYEND
SIFDKFECCLSGDGLRVATGSYSNLFRVFGASQGSTEAATLEASKNPMRRQIQTPARPSR
SIGSMTRVVRRGSESPGTEANGNAYDFTTKLLHMAWHPTENSIACAAANSLYMYYA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
tttctgtttgcacaattttcttccgcagttgatatcatttcagccatcgaatttgataaa
agtggagaccatcttgcaactggtgaccgtgggggccgagtagttctttttgagaggaca
gatactagagatcatggagggtccaggagagatcttgagcagacagattacgcagtcagg
catcctgagtttcgatataaaacagaatttcagagtcatgaaccagagtttgactatctc
aagagtttggagatagaggagaaaatcaacaaaattagatggtgtcagccagcaaatggt
gcattgtttctgctttccacaaacgataaaaccatcaaatattggaaggtacaagagaag
aagatcaagaaaatttctgaaatgaatattgatccatcgaaagcagaaagctcaagtagc
cctcctcaattagttgctaatggattgcctgccgataaagcacatggctacctgagcaat
gacttttctttcccgccaggaggcattccatctctgcgtttgcctgtggttactagccag
gagaccaaccttgtggctagatgccgaagagtgtatgctcatgctcatgattaccatatt
aattcaatctcaaatagcagtgatggagaaacctttatttcggctgatgatctgcgagta
aatctctggaatttggaaatcagcaaccagagtttcaatattgttgatgttaagcccaca
aacatggaagacctaactgaggtaattacatcagctgagtttcatcctatccattgtaac
atgctcgcatatagtagttcaaaaggctccatccgtttgattgatatgcggcaatcagct
ctgtgtgattctcatacgaaattatttgaagaaccagaagcacctgggtcaagatcgttt
ttcacagagataattgcgtcaatttcagatattaaattttcaaaggatgggagatacata
cttagtcgcgattacatgacgctcaagctgtgggacataaacatggattctggtccagtc
gcatcttaccaggttcatgaacatctgagaccaaggctatgcgatctatatgaaaatgac
tccatctttgataaattcgagtgttgtctgagtggcgatggattgagggtagcaacaggt
tcctacagcaatttattccgcgtatttggagcgtctcaaggaagtactgaagctgcaact
ttggaagctagcaaaaacccgatgaggaggcaaatccagacacctgcaagaccttccaga
tctattggcagtatgacacgcgtggttagacgaggatcagagagtcccggaacagaggcg
aatgggaacgcatatgatttcacaactaagttgcttcatatggcttggcacccaacagaa
aactcaattgcttgtgcagcagcaaacagcttgtacatgtactatgcatga
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