Camelina sativa (false flax): 104743445
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Entry
104743445 CDS
T05044
Name
(RefSeq) SWI/SNF complex subunit SWI3C-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104743445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104743445
03036 Chromosome and associated proteins [BR:
csat03036
]
104743445
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104743445
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104743445
PBAF complex
104743445
GBAF(ncBAF) complex
104743445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
DUF7685
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
104743445
NCBI-ProteinID:
XP_010462830
LinkDB
All DBs
Position
14:complement(10610411..10614134)
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AA seq
655 aa
AA seq
DB search
MPASEDRRGKWKRRKRGGLSAARKPKQEEEDIEEEDEENNNNHNNEEIDDVDNNADELHQ
NGGATPDPGHGIGEVVEDSGSRISDFPSVVKRVVIRPHASVTAVVAAERGGLIGETRGQG
SLPSLENISYGQLQALSTVPADALSFDLERSDGASSAYVISPPPILEGEGVAKRFGDLVH
VLPMHSGLFVSLCSNLLXNHCNHCSRPLPTVYFQSQKKGDIVLCSDCFHHGRFVVGHSCL
DFVRVDPSKFYGDQDGDNWSDQETLLLLEAVELYNENWIQIADHVGSKSKAQCILHFLRL
PVEDGLLDNVEVPGVTDLENPANGYDHKGTDSDGDIPGYSEQDSDTEIKLPFVKSPNPVM
ALVAFLASAVGPRVAASCAHESLAILSEDDRMKSEGVQGKEAGENQQQDENSGAAKTSSQ
NGAEPQTPLPEDKVMVAFRAGLSAAATKAKLFADHEEREIQRLSANIVNHQLKRMELKLK
QFAEIETLLMKECEQVEKTRQRFAAERVRMLSARFGSPGGIPPQTNNNLQGMSLSTGSNS
INTLLQQQQQQVSATSQPSIIPGFSNNPQVHAQMQFMARQQQQQQQAFSFGPRLPLNAIQ
TNAGSTASPNVMFGNNQLNNPAGSGGAASINQPSFSHPMVRSSTGSGSGSGLGLN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgccagcttctgaagatagaagagggaaatggaaacgacggaagcgaggtgggttatcg
gcggcgaggaaaccgaaacaagaggaggaagatatcgaggaagaagacgaagagaacaac
aacaatcacaacaacgaagaaattgatgacgttgataataatgccgatgagcttcaccag
aacggcggcgcaactcccgatccgggacacggtattggcgaagtagttgaagattccggt
tcgcgcatctctgatttcccctctgtggttaagcgtgttgtgatccgtccacacgcgtct
gtaacggccgttgtggctgctgagagaggtggtttgattggggagactagaggtcaaggt
tcgcttccgtctctggagaatatttcctatgggcaattgcaagcgttgtctactgtaccg
gctgatgctctgtcctttgatcttgagaggagtgatggagcgtcttctgcttatgttatc
tctccaccacctattttggaaggagaaggagttgctaaacggtttggggatctggttcat
gtcttgcctatgcattcaggtttgtttgtttctctttgctcgaatttattanataatcat
tgcaaccattgttctcgaccgcttccaactgtgtacttccagtcacaaaagaagggggat
atagtcttatgctctgattgttttcaccatggaagatttgttgttggacattcttgtctt
gactttgtaagagtggatccatccaaattttatggcgatcaagatggagacaattggagt
gatcaggaaactctcttacttcttgaagctgtggaactctacaatgaaaattggattcag
attgcagatcatgttggttccaaatcaaaagctcagtgcattcttcattttcttcgatta
cctgtggaggatggtcttttggataatgttgaggttccaggtgtaactgatttggaaaac
cctgcaaatggatatgaccacaaaggaacagattcagatggagatatacccggatattcg
gagcaagattctgacacggagatcaagcttccttttgtgaagtctccgaatccggttatg
gcattggttgcatttttggcatcagctgttggacctcgagttgctgcgtcatgtgcccat
gagtcccttgcgattttatctgaggatgataggatgaaatctgagggtgtgcaagggaaa
gaagctggagaaaatcagcagcaagatgaaaactcaggagcagctaaaacatcgagccaa
aacggagcagaaccacagactccattgccagaggataaggttatggtggcatttagagcc
ggtctatcagctgcagcaacgaaagcaaaattgtttgccgatcatgaagaacgtgagatc
caaaggctttctgcaaatattgtaaatcaccagctgaagaggatggagctgaagctaaaa
cagtttgcagaaattgaaacattgttgatgaaagaatgcgaacaagtagagaaaacacgt
cagagatttgctgcagaacgagtccgtatgctctcagcaagatttggatcacctggagga
atccctccacagactaataataatctccaagggatgtctctgtccacaggtagtaacagc
atcaatactctcttgcagcagcaacaacaacaagtttcagcaacatctcaaccaagcatc
attccaggattcagcaacaacccgcaagtccatgcgcagatgcagttcatggcacgccaa
caacaacagcaacaacaagctttctcgtttggcccgagattgcctctcaatgcgatacag
acgaatgcaggatcaacggcttcaccaaatgtcatgtttggcaacaaccaacttaataac
cctgcaggttcaggaggagcagcatccatcaaccaaccctcgtttagtcacccgatggtt
aggtcttccacgggttcaggctcagggtccggtttaggcttaaactga
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