Camelina sativa (false flax): 104743480
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Entry
104743480 CDS
T05044
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23-like
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104743480
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
104743480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
104743480
NCBI-ProteinID:
XP_019091037
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All DBs
Position
14:11653528..11660692
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AA seq
1387 aa
AA seq
DB search
MEQSQRTTTVAAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRPKPDESLRDPPNKSQKR
VHAPNRDLPPRNEQFILDFEQLQTQFNDPEQLRTITESVLIPLVVQCSNHAPRAEFLLFA
LRTLCRISYINWDTFLPSLLSSVSAAEASITQSAQAAAAAAGSSATSSQSLVPVSANAIA
SSSNYHSAYPTSLLPAAHGIGSPSPSGNEPGMSFPQVRSLENGQQMIARAGQSVRENAMR
NSQRIRAAAINSLRQLSCKIILIGVEFNLKPVTHAEIFQYMMNWLVNWDKRDLGTEDSAG
KSWRSEKTLAEWLRSCLDVIWLLVEEGVELVMTALNSDAKKVETTRKILSFHREDRNSDP
NNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWRSKGERMMDYMNMDD
RSIGMFWVVSYTMAQPACETVINWLSSAGMAELPGLQPNDRVMMTQEVTPLPMSLLSGFS
MNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNASLLSKP
GVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLIL
SLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADADHLVYLQTMLEQILATSQ
HTWSEKTMRHFPTLLRDTLVGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVVTY
LGHSFPQHRQYLCAGACLLMQGHADNINSANLARVLREVSPEEVTANIYTLVDVLLHHIH
VDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPD
LLLRIKNYCQNRGSPEHWLITQVFKRNDLQKALGNHLSWKDRYPTFLDDIAARLLPVIPL
VVYRLIENNAMEQADNLLLLHSHFLAYHPLRFTFVRDTLAYFYGHLPGKLVLRMLKVLDL
SKIPFSESFPQYISPAGAAVCPPLDYFATLLLNLVNNVIPPLSSSSNCSSRSGSMADILN
SSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIV
SSLVQIIVNIQSTLIQSGNGFQGAANGVGQGSVLPTSPSGGSTDSMSAGRSTCLIPGINT
ASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHTQLYSEASRVIRETWWLKDGTRSQGE
IDSALGYALMDPTWAAQDNTSTAIGNTVALLHAFFSNLPQEWLDGTNNIITNLRPVTSVA
MLRVVFRIMGPLLPRLANTHTLFNKTLALLLSALVDVFGKNAQTTAPVEASQIADLIDFL
HHIIHYEGQGGAVQTNSKPRPDILVLIGRVADSLRPDVQHLLAHLKTDPNFSIYAAAHQN
TAKTNTS
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atggaacaatctcagcgaacaacaacagtcgctgctgcaacgccttcgtcatcacgatct
taccaattccaccctgctcgtgctgctatcattgatctcttcaatctctacttagggaga
ggaagccgtcctaagcccgatgagtccctccgagatcctccgaacaaatcacagaagcgt
gttcatgctcccaacagagacttacccccaagaaacgagcaatttatattggattttgag
cagcttcaaacccaattcaatgatccagagcaattgaggacgattacggagtcagttttg
atacctttggttgtgcaatgtagcaaccatgcgcctcgtgctgagtttcttctctttgca
ttgcgtacattgtgtaggattagttatatcaattgggatacttttttaccatcccttctc
tcttcggtttctgctgctgaggcgtccataacacaaagtgctcaagctgctgcagcagcg
gctggttcttctgctacttcttcacagtctttagttcctgtatctgcgaatgctatcgct
agctcgtcgaattatcattccgcttatccaacgtcattgttgcctgcagctcatggtatt
ggttctccatcaccttcagggaatgagccgggaatgtctttcccacaggttagatctttg
gagaatgggcagcagatgattgcaagggcaggccagagtgtaagagagaatgctatgaga
aacagtcaacggattagagctgctgctatcaacagtctccgtcagctcagttgcaagatt
atcttgattggtgttgaatttaatctcaaacctgttactcatgccgagattttccagtac
atgatgaattggcttgtgaactgggacaagagagatctgggaactgaggactctgcagga
aagtcgtggagatctgagaagactttagctgaatggttacggagttgtttggatgtgatc
tggctgttggtagaagagggcgtggagcttgtgatgactgcgttgaattcagatgctaaa
aaggtggagactactaggaagatcttatcatttcacagggaagacagaaattctgatccc
aataatcctcagagtgtgttgcttgacttcgtaagcagttgtcagaatctacggatttgg
tcactaagcacaacgactagggcatacctaaacaatgaacagctgttgaagggaaagcag
atcgatgagtggtggagaagcaaaggggagcgcatgatggattatatgaatatggatgat
aggtcgattggcatgttttgggttgtttcctacaccatggcacaaccagcatgtgaaaca
gttataaattggttatcttcagctggcatggctgagttgccgggattacagccaaacgac
agagtaatgatgacgcaggaagtgacaccgttacctatgtcattgctatctggcttttca
atgaacttgtgcttgaaattggcccttcagatggaagaagctttgtttgttagccaggtt
gttcctagtattgcaatggttgagacatacacaagattgctgctgatatcccctcattcg
atgttccgttcgcatttcagtcaattggcccagcgaaatgcttctctgctaagcaagcct
ggggtgacgttgcttgttcttgagattctgaattatcgtttgcttccgctctacagatac
caaggaaagagtaagactttaatgtacgatgtaactaaaataatctctgcattgaaagga
aaacgtggtgaccaccgtatattcagactagctgaaaacttgtgcatgaatctcatttta
tcactcagagactttttttctgtgaaacgggagggaaaaggtccaactgaattcactgaa
acattaaaccgcataaccatcatgactcttgctatcacgatcaaaacacgtggtatcgct
gacgctgatcatttagtttatctgcaaaccatgttggaacaaatactcgcgacgagtcag
catacatggtcagagaagacgatgcgacattttccaacccttctccgtgacactttggtt
ggacgggtagacaagaggggcctatcaattcaagcgtggcaacaggctgaaacaactgtg
ataaaccagtgcactcagcttctctcaccatctgctgaacccgcgtacgttgtgacatac
ctcggtcacagttttcctcaacaccgccagtatctatgtgctggtgcttgtctgctgatg
caaggccacgctgataacatcaacagcgcaaatctggcacgggttctgagagaagtttct
cctgaagaagtcactgctaacatatacactttggtcgatgttttgcttcaccacattcat
gtagatcttcagcaaggacaatctttagaggcagttctagacaaggcaggcgcaaatctt
gcatttttcttctggacacacgaaatgcttcctctcgacatttttcttctagcgctcatt
gatcgtgatgatgatccgcacgccttgataattgcaatgagcttacttaaaacgccagac
cttctgctgaggattaaaaactactgccaaaaccgtgggtctcctgagcactggcttatc
acacaggtgttcaaacgaaatgacttgcagaaggcccttggtaaccatctttcttggaag
gacaggtatccgacgttcttggatgatattgccgcgcgtttgcttccagttatcccacta
gtggtgtacaggctcatcgagaacaatgcgatggagcaagctgataatcttttgctattg
cactcgcattttctagcttaccatcctctcagattcacgtttgttcgtgacacactcgcc
tatttctatggtcatcttcctgggaaacttgttctgcgcatgctcaaagtacttgatctc
agcaagattccattctctgaatcattcccgcagtacattagcccagccggtgccgctgta
tgcccacctctagattacttcgccactcttctgcttaatctcgtaaacaacgttatacct
ccacttagcagcagcagcaactgcagctcgaggtctggctcaatggcagacatcttaaac
agctcagcgagacctcctcatggaaaaactccaggaacatctcagcctggaccagcaaac
gcctctgagggccagaaagcattctatcagatacaggatccaggaacttacactcaattg
gttcttgagacggccgtgatcgagatcctctcgcttcccgtctccgctgctcagattgtc
tcttcgcttgtccagataattgtcaacatacaatcgactctcattcaatctggaaacggg
ttccagggcgctgcaaacggggtggggcaaggttcagtactgcctacgtctccctcagga
gggagcacggactccatgagcgctggccggtccacttgtctgattcctggtatcaacacg
gcgagctttgtctctagaagcggttatacatgtcagcaactgtcgtgtctgttgattcaa
gcttgtgggctcttgttggctcagctccctccggattttcacacgcagctttactcggag
gcatcacgtgtgataagggaaacatggtggcttaaggacgggacgagatcacaaggtgaa
atagactcggctcttggatacgctttgatggatcctacatgggctgctcaggacaacacc
tctactgccataggaaatacagtcgccttgcttcatgctttcttcagcaatctcccacaa
gaatggcttgatggcacgaataacatcatcacgaatctccgacctgtgacatctgttgca
atgctcagagttgtattccgtattatggggccactgcttccgaggctcgccaacacacat
acgctctttaacaagacgctagcccttctcttaagcgcattggtcgatgtgtttggaaag
aacgcacagacaacagcccctgttgaagcatcccagattgcagatcttattgatttctta
caccatattattcactacgagggacaagggggagctgttcaaactaacagcaagccgaga
ccagacatcttggtgttaatcggaagagtagcagattctctccgaccagatgtacagcac
cttctcgctcacctcaaaaccgaccccaatttttctatatacgcagctgctcatcagaat
actgcaaagaccaacacctcttaa
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