Camelina sativa (false flax): 104743765
Help
Entry
104743765 CDS
T05044
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
csat
Camelina sativa (false flax)
Pathway
csat03013
Nucleocytoplasmic transport
csat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104743765
03015 mRNA surveillance pathway
104743765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104743765
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
104743765
mRNA cycle factors
P-body specific factors
104743765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
104743765
NCBI-ProteinID:
XP_010463114
UniProt:
A0ABM0VYK3
LinkDB
All DBs
Position
14:18930060..18935606
Genome browser
AA seq
499 aa
AA seq
DB search
MKEPLQKKKVVVRHLPPSLSQSDLLSQIDPRFGDRYNWVSFRPGKSSFRNQKCSRAYVAF
KAPEDVYEFAAFFNGHVFVNEKGAQFKAIVEYAPSQRVPKPCDKKDPREGSISKDPDYLE
FLKVIAQPVENLPSAEIQLERREAEQSGAAKAAPIVTPLMEFIRQKRATVMGSQGLSDVR
RGGRRARAVSANKPSPRPSKRNIEKKKYVEKESSKNVSRKVALDVGSSKQEYHQQNTSGK
EIPEKDSASVLDSSLPGIALTMDSGKKKILLLKPKDRDNPDNPPPQQEQHRETNLSGNFT
ASRQNQKIDVGGRLIKGILLRSDPRPSQSSTFVQPEQRMEPSEAETYKRPPRSANTRAGK
DYSVTNSEKQERRTRNKDRPDRAVWAPLRRDGSNISEDLPLSSAANNGEVKERIYSQRSG
EVMNSSGGHTLENGSTRHSSRRVGGRNRKEDVITGEGKSSRRGGGGGSNSHEASYQSLLL
HLKICTSNGYLHYFWSHTI
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaacctttacagaagaagaaggtggtcgttcgccacttgcccccttctctttct
cagtccgatctcttgtcccagattgatcctcgtttcggtgatcgttacaattgggtttcg
tttcgtcccgggaagtccagctttaggaatcagaagtgttcacgggcctacgtagctttc
aaggcaccagaagatgtttatgagttcgctgcatttttcaacgggcatgtgtttgttaat
gaaaagggtgctcagtttaaggctatagttgaatatgcaccttcacagcgtgtgcctaaa
ccgtgtgacaagaaagatcctcgtgaagggtctattagcaaagaccctgattatctggaa
ttccttaaagtgattgctcaacctgttgagaatctccctagtgctgagatccagttggaa
agaagagaagctgagcagtctggtgctgctaaagcggctcccattgttacccctcttatg
gaattcatacgtcaaaaacgtgctactgtgatgggatcccagggtttatcagatgtccga
agaggaggtagaagagccagagcagtctctgctaacaagccaagtccaaggccctccaaa
cgaaacattgaaaagaaaaagtatgtggaaaaagaaagctcaaaaaatgtttcccggaag
gttgcattagatgttggcagctctaagcaagaatatcatcagcagaatacaagtggaaag
gaaataccagaaaaggatagtgcctctgtcctagatagttctctcccagggattgcattg
actatggattctgggaagaaaaagattttgctcctgaaaccgaaagaccgagacaatcct
gataaccctccaccacaacaagaacagcatagagaaaccaatctttctggaaacttcacg
gcttcaagacaaaatcagaaaattgatgttggagggaggttgatcaagggaattcttctg
agaagtgacccaagaccgagccagtcttcaacttttgtccagcctgagcaaagaatggaa
ccctcggaagcagaaacctacaaacgaccccctcggtcagccaacactcgagcagggaaa
gattattctgttaccaacagtgagaaacaagagaggcgtacaagaaacaaggacagacct
gatcgtgctgtgtgggctcctcttcgtcgtgatgggtccaatatcagcgaggatctaccg
ctatcctcagcagcaaacaatggtgaagtgaaagaaagaatatactctcaaagatctgga
gaagtgatgaactcgtctggtggacacactctcgagaatggttctactagacattctagt
cgtcgtgttggaggtcgcaatagaaaagaagacgtgattactggtgagggtaaatcatcc
cggagaggaggtggtggtggttctaattcacatgaggcaagctaccaaagccttttacta
catcttaaaatatgcaccagcaatggctatctccattatttctggtctcacactatataa
DBGET
integrated database retrieval system
