KEGG   Camelina sativa (false flax): 104744133
Entry
104744133         CDS       T05044                                 
Name
(RefSeq) UBP1-associated protein 2C-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csat  Camelina sativa (false flax)
Pathway
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104744133
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104744133
   03041 Spliceosome [BR:csat03041]
    104744133
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     104744133
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104744133
Spliceosome [BR:csat03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    104744133
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 104744133
NCBI-ProteinID: XP_010463448
LinkDB
Position
14:complement(29677822..29687145)
AA seq 422 aa
MDMLKKRKLDENGIAMLNEGVIGAVSSRLMPHDARKIIERFSTDQLLDILQEAVVRHPDI
LEIVRSTADSDISQRKLFIRGLAAETTTEGLRSLFSNYGDLEEAIVILDKVTAKSKGYGF
VTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNQGTTNSHVTDISMRKIYVANVPFDMP
ADRLLNQFLAYGDIEEGPLGFDKITGKSRGFALFVYKTAEGAQAALAEPMKVVDGKNLQC
KLAIDGKKGKPPGQDGGAGVGHGHGHGHGHGEGMGMVPPSGPYGAATGGHGGPAGLGTYG
GYSGGGPHHMNSTPSSVGVAAAGGYGGAYGGHYSAYGGAGTGAYGGLGAGSMGVSGGAYG
PGSGSGAYRMPPSSMSGGGYPESGHYGHSSASAYPGQHQPVGSSPVPRVSLGGMYPNGPP
NY
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggatatgttgaagaagcgaaagctcgatgagaatggaatcgcgatgctaaacgaaggt
gtcatcggcgccgtttcgtctcgattgatgccacatgacgctaggaagattatcgagcgg
ttctctactgatcagcttctcgatatcttacaagaagctgttgtacggcatccagatatc
ctcgagatcgttagatcaaccgcagattccgatatctctcagaggaagctattcatccgt
ggtctcgcggcggagacgacgacggaaggtcttcgttcgcttttctccaattacggagat
ctcgaggaagctatcgtgattctcgataaggttactgctaaatccaaaggttatggtttc
gtgacttttaaacatgttgatggagctctgcttgctttgaaagagccgtctaagaagatt
gatgggcgcgttacggttacgcagctagcggcggctgggaatcaaggtacgacgaactca
catgttacggatatatccatgaggaagatttatgtggcgaatgttccgtttgatatgccg
gcggataggttgttgaatcagtttttggcttatggggatatcgaggaaggtcctttgggt
tttgacaagattactggtaaatcaaggggttttgcgttgtttgtttataagactgctgaa
ggtgctcaggctgctcttgctgaacctatgaaggtggttgatggtaagaatttgcagtgt
aagttggctattgacggtaagaaaggaaagccaccaggtcaagacggtggtgctggtgtt
ggacatggtcacggtcatggtcacggtcacggtgagggaatgggtatggttcctccttct
ggaccttatggcgcagctactggtggtcacggtggacctgctgggttgggtacttatggt
gggtattcaggaggaggaccgcatcacatgaattccacaccatcatcagtgggtgttgct
gctgctggtggctatggaggtgcatacggtggtcattacagtgcttacggtggtgcagga
actggtgcttatggcggtcttggtgcaggatcaatgggtgtttccggtggtgcttatggg
cctggttctggaagtggggcgtatagaatgccacccagttcgatgtctggtggtggttat
ccagagagtgggcactatggacattcatcagcttcagcatatcctggacagcatcagcct
gttggttcctctccggtgccaagagtttctcttggaggaatgtaccccaatggtcctcca
aattactga

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