Camelina sativa (false flax): 104744181
Help
Entry
104744181 CDS
T05044
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
csat
Camelina sativa (false flax)
Pathway
csat03022
Basal transcription factors
csat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104744181
09124 Replication and repair
03420 Nucleotide excision repair
104744181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104744181
03400 DNA repair and recombination proteins [BR:
csat03400
]
104744181
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104744181
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104744181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
APH_6_hur
F-actin_cap_A
Motif
Other DBs
NCBI-GeneID:
104744181
NCBI-ProteinID:
XP_010463493
LinkDB
All DBs
Position
14:complement(31058798..31065661)
Genome browser
AA seq
503 aa
AA seq
DB search
MAGEQVEKRVKYKSSVKDPGTPGFLKISEGMLLFVPNDPKSDSKLKVQTQNITQKFTKEG
SNKPPWLNLTIKQGRNHIFEFENYPDMHACRDFITALGKSDEEPKKAAVSTSTEQLSNKE
LELRFKLLRENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSIRKSKQQLGLKSMMVS
GIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFINYVPSKMTEKDFWTKYFRAEYLY
STKNTAVAAAEAAEDEELAVFLKPDEILARETRQKIRRVDPTLDMEADEGDDYSHLMDHG
IQRDGTMDVVEPQNDQFKRSLLQDLNRHAAVVLEGRSIDVDSEDTRVVAEALTRVKQGLM
FHLKIADSIQVFSSLTRTISTAKNIIGKNPRESFLDRLPKSTKDEVLHHWTSIQELLRHF
WSSYPITTPYLHTKVGKLKDAMSNTYSKLDAMKESVQSDLRHQVSLLVRPMQQALDAAFQ
HYEADLQRRIAKSSGGERPNGYV
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgagcaagtggagaagcgagtcaaatacaagagctctgtcaaggatccagga
actcctggatttctcaaaattagtgaagggatgttgctcttcgtccctaatgatcccaaa
tcagattcaaagctcaaagttcagactcagaacataactcaaaaatttaccaaagaagga
tcaaataaacctccttggctcaatctcactatcaagcagggaaggaatcatatctttgag
tttgaaaattatcctgacatgcatgcttgccgtgatttcatcacggcccttggtaaaagt
gacgaggagcctaagaaagcagctgtctcgacatctaccgagcaactcagtaataaagaa
ttggagctacgattcaagcttcttagagaaaatagtgagctgcagagattgcataagcag
tttgtggaaagtaaagtcctgacggaagatgaattctgggctacaaggaagaaattgctt
ggtaaagattccatccgaaagtcaaagcagcagctcgggcttaagagcatgatggtttct
ggcatcaaaccatctactgatggacggactaatagagtgacgtttaacttgacacctgag
atcatttttcagatttttgctgagaagccggctgtacggcaggcattcataaattatgtt
ccgagtaagatgacagaaaaagacttctggacaaaatattttagagcagaatatctttac
agcaccaaaaatacagcagtagctgcagcagaagctgctgaggacgaggaactcgctgta
tttctgaagcctgatgagatattggctcgggaaactcgtcaaaagattagacgggttgat
ccaactcttgacatggaggctgacgagggagacgactacagtcatcttatggaccacggg
atccagcgtgatggcaccatggatgttgttgaaccacagaatgaccagtttaaacgatca
cttttgcaagatcttaatcgtcatgctgctgttgtattggaaggcagaagcattgatgtt
gattcagaagatacgagggttgttgcagaggctctcacacgggttaaacaaggtttgatg
tttcacctaaaaattgctgactctattcaggttttcagttcgttaacccgaactatctca
actgccaaaaatataattgggaagaacccacgagagagctttctagatagattaccaaag
tccactaaggatgaagttctacaccattggacatcaatacaagaattactaagacatttt
tggtcatcttatccgataacgaccccatatcttcataccaaggttggtaaactgaaggat
gcaatgtccaatacttattcaaaactcgatgcaatgaaagagtcagtgcaatctgatctc
cggcatcaggtttctttactggttcgtccaatgcaacaggctcttgatgctgcgttccaa
cactacgaagcagatctgcagagaagaatagctaagagcagcggcggcgaaagaccaaat
gggtacgtatag
DBGET
integrated database retrieval system
