Camelina sativa (false flax): 104744282
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Entry
104744282 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104744282
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104744282
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104744282
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104744282
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104744282
03009 Ribosome biogenesis [BR:
csat03009
]
104744282
03110 Chaperones and folding catalysts [BR:
csat03110
]
104744282
04131 Membrane trafficking [BR:
csat04131
]
104744282
03051 Proteasome [BR:
csat03051
]
104744282
03029 Mitochondrial biogenesis [BR:
csat03029
]
104744282
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104744282
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104744282
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104744282
Complex C
Prp19-CDC5 complex
104744282
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104744282
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104744282
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104744282
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104744282
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104744282
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104744282
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104744282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
DUF7674
Motif
Other DBs
NCBI-GeneID:
104744282
NCBI-ProteinID:
XP_010463615
UniProt:
A0ABM0VZJ1
LinkDB
All DBs
Position
2:28242019..28244515
Genome browser
AA seq
652 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKN
QVAMNPVNTVFDAKRLIGRRFSDASVQSDRKLWPFTIISSGTAEKPMIVVNYKGEEKQFA
AEEISSMVLIKMREISEAYLGTTIKNAVVTVPAYFNDSQRQATKDAGVIAGLNVLRIINE
PTAAAIAYGLDKKATSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDF
DNRMVNHFVQEFKRKSKQDITGLARPLRRLRTACERAKRTLSSTAQTTIEIDSLYGGADL
FAPITRARFEELNMDLFRKCMEPVEKCLRDAKMDKNSVHEVVLVGGSTRIPKVQQLLQDF
FNGKELCKSINPDEAVAYGAAVQGAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTTL
IQRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERARTKDNNLLGKFELSGIPPAPRGVPQ
ITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKDEIEKMVQEAEKYKSEDEEHK
KKVEAKNALENYAYNMRNTIRDEKIGEKLPAADKKKIEDLIDEAIQWLDGNQLAEADEFE
DKMKELEGVCNPIIAKVYQGAGGEAGGPGPHGMDEDAPPAPGGSGPKIEEVD
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaagggagaaggtcctgcgatcggtatcgatcttggtaccacctactcttgt
gttggagtgtggcaacacgaccgtgttgagatcattgctaatgatcaaggtaaccgaacc
acgccgtcttacgtcgctttcaccgacaccgagaggttgatcggtgatgctgctaagaac
caggtcgccatgaaccctgttaacactgtcttcgatgcaaagaggttgattggtcgtaga
ttcagtgacgcatctgtccaaagcgacaggaagttgtggcctttcactatcatctcttca
ggaactgctgagaaaccaatgatcgtagtcaactacaagggtgaagagaaacagttcgcc
gctgaggagatctcttccatggttctcattaagatgcgtgagattagtgaagcttacctt
ggcaccactatcaagaacgctgtggtcaccgttcctgcttacttcaatgactctcagcgt
caagccacaaaggatgctggtgtcatcgctggtttgaatgttctgcgtatcatcaacgag
cccactgctgctgccattgcctacggtcttgacaagaaggccaccagtgttggagagaag
aacgttctgatctttgatcttggtggtggtacttttgatgtctctcttcttacaattgaa
gaaggtatctttgaggtcaaggctactgctggagacactcatcttggtggtgaagatttc
gataacagaatggttaaccactttgttcaagagtttaagaggaagagcaagcaggacatc
actggcctcgcaagaccccttaggaggctgagaacagcttgcgagagagcaaagagaact
ctttcttccacggcgcaaacgaccatcgagattgactctctctatggaggagctgacctc
tttgctccaattacccgtgctagattcgaagagcttaacatggatcttttcaggaagtgt
atggagcctgttgagaagtgtctccgtgatgctaagatggacaagaactcagtccatgaa
gttgttcttgtcggtggttccacccgtatccccaaagttcaacagcttctccaagatttc
ttcaatggtaaagagctctgcaagtctatcaaccctgatgaggctgttgcatacggtgca
gccgtccagggagctattctcagcggtgaaggaaacgaaaaagttcaagaccttctgctc
cttgatgtaactcctctctcccttggtttggaaactgctggtggtgtcatgaccactttg
atccaaaggaacacaaccatcccgaccaagaaggagcaggtcttctccacttactcagac
aatcagcccggcgtgttgatccaggtgttcgaaggtgagagagccagaaccaaggacaac
aaccttctcggtaaattcgagctctccggaatccctccggctcctcgtggtgtccctcag
atcactgtctgctttgacatcgatgctaatggtatcctcaacgtatctgctgaggacaag
accaccggacagaagaacaagatcaccatcacgaatgacaagggtcgtctctccaaggac
gagattgagaagatggttcaagaagcagagaagtacaagtcagaggacgaggagcacaag
aagaaggtcgaggccaagaacgctcttgagaactacgcttacaacatgcggaacaccatc
cgtgatgagaagatcggtgagaagcttccagctgcagacaagaagaagattgaggacttg
attgacgaagcaatccaatggcttgatggtaaccaattggctgaagctgacgagtttgaa
gacaagatgaaggagctggagggtgtttgtaatccgatcatcgccaaggtataccaagga
gctggtggtgaagccggtggtccaggtccccatggtatggacgaagatgctcctcctgct
ccaggcggttctggccctaagatcgaggaggtcgactaa
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