KEGG   Camelina sativa (false flax): 104744381
Entry
104744381         CDS       T05044                                 
Name
(RefSeq) THO complex subunit 7B-like
  KO
K13176  THO complex subunit 7
Organism
csat  Camelina sativa (false flax)
Pathway
csat03013  Nucleocytoplasmic transport
csat03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104744381
  09122 Translation
   03013 Nucleocytoplasmic transport
    104744381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104744381
   03041 Spliceosome [BR:csat03041]
    104744381
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     104744381
Spliceosome [BR:csat03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    104744381
SSDB
Motif
Pfam: THOC7 DUF745 Pox_A_type_inc APG6_N AAA_15 mRNA_cap_C
Other DBs
NCBI-GeneID: 104744381
NCBI-ProteinID: XP_010463734
UniProt: A0ABM0VZV2
LinkDB
Position
15:complement(632153..633653)
AA seq 236 aa
MSVKARRISGRLETVVAKVNYAFDPVDDDKIIRNRLLTRTTTTRGEPPLKKLQKKFTSFV
LEVDKDEENYNECGKLAKAFLQELSTFEIPLLKSQAVVEANRREKESFNEVKDETERQIT
QAKTEIEDLKKQLEESKIDRQHKEECETIRKLISAQPPRSETEKVINELNKEIAELEAES
TASWRLLELRKKQFALLLHVVDELQNTMEDEQKSLVDEIRTALDDQRNVTEPMSVD
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcagttaaagcaaggaggatctctggtagattagagactgtagtggctaaggttaat
tatgcatttgatccggtggacgatgacaaaatcataagaaaccggctactgaccagaacc
accaccactcgaggggagcctccgttgaaaaaacttcagaagaagttcacttcttttgta
ctcgaagtggataaagatgaagagaactacaacgagtgcggtaagcttgcgaaagcattt
ttacaggaactgtctacttttgaaatcccgcttttgaagagccaagcggttgtggaagct
aaccgtagggaaaaagagagctttaacgaggtgaaagatgagactgagaggcagataacg
caggcgaaaactgagattgaagatcttaagaagcagcttgaggagagtaaaattgatagg
cagcataaagaagagtgtgagacgataaggaaactgatttctgcgcaacctccgaggtca
gagactgagaaggttataaatgaattgaacaaggagattgctgagcttgaagcagagagc
actgcaagttggagattgcttgagcttaggaagaagcagtttgctctgctgttgcatgtg
gtggatgagttgcagaacactatggaagatgagcagaagagtttggtggacgagattcgg
acagcgttggatgaccagaggaacgtaaccgagcccatgtctgttgattaa

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