Camelina sativa (false flax): 104744805
Help
Entry
104744805 CDS
T05044
Name
(RefSeq) ISWI chromatin-remodeling complex ATPase CHR11
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104744805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csat03021
]
104744805
03036 Chromosome and associated proteins [BR:
csat03036
]
104744805
Transcription machinery [BR:
csat03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104744805
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104744805
RSF complex
104744805
WICH complex
104744805
B-WICH complex
104744805
NORC complex
104744805
BRF complex
104744805
NuRF complex (fruit fly)
104744805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
Myb_DNA-binding
HDA2-3
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
104744805
NCBI-ProteinID:
XP_010464212
LinkDB
All DBs
Position
15:2510810..2517129
Genome browser
AA seq
1056 aa
AA seq
DB search
MARISNSDEAFSSEEEEERVKENEEVEDEEELEAVARSSGSDDDEVAPADESPLSDGEAA
PMEDDYEDEEDEEKAEISKREKARLKEMQKLKKQKIQELLDSQNASIDADMNNKGKGRLK
YLLQQTELFAHFAKGDASSSQKKGKGRGRHASKITEEEEDEEYLKEEEDGLTGSGNTRLL
TQPSCIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGING
PHMVVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRDDLLVAGKFDICVTSFEMA
IKEKTALRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWAL
LNFLLPEVFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKET
ILKVGMSQMQKQYYKALLQKDLEAVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY
TTGDHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGN
TGGDERDASIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDR
AHRIGQKKEVQVFRFCTESAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMV
RYGAEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTENAIQFKMDDSADFYDFD
DENKDENKLDFKKIVSDNWNDPPKRERKRNYSESEYFKQTLRQGGPAKPKEPRIPRMPQL
HDFQFFNIQRLTELYEKEVRYLMQTHQKNQLKDTIDVEEPEGGDPLTAEEVEEKEQLLEE
GFSTWSRRDFNTFLRACEKYGRNDIKSIASEMEGKTEEEVERYAKVFKERYKELNDYDRI
IKNIERGEARISRKDEIMKAIGKKLDRYRNPWLELKIQYGQNKGKLYNEECDRFMICMIH
KLGYGNWDELKAAFRTSPLFRFDWFVKSRTSQELARRCDTLIRLIEKENQEFDERERQAR
KEKKLAKSATPSKRTVGRQASESPSSTKKRKHLSMR
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggatttcgaattccgatgaggctttctcgtctgaggaggaagaggagcgggtt
aaggaaaacgaagaagtagaagacgaggaggagctcgaggctgttgctcgttcttctggc
tccgacgatgacgaagtagcccccgctgacgaatccccactctccgacggagaagccgcc
cctatggaagacgattacgaggacgaagaagatgaagaaaaagctgaaatcagcaaacgt
gagaaagccagacttaaggagatgcagaagttgaagaagcagaagattcaggagctgctg
gactcacaaaatgcttccattgatgctgatatgaacaataagggaaaagggagattgaag
tatcttctgcagcagactgagttatttgcacactttgctaaaggtgatgcatcctcttct
cagaaaaaggggaaaggaaggggtcgtcatgcttccaaaataactgaagaagaggaagat
gaagagtatcttaaggaagaagaggatggcttaactggatctggaaacacacggttgctt
acacagccctcttgtattcaagggaagttaagagattaccaattagctggtttaaactgg
ctcattcggctgtatgagaacggcatcaatggaattcttgctgatgaaatgggtctgggg
aagacgcttcagacgatttctttgttggcataccttcatgaatacaggggaatcaatggc
cctcatatggtggttgctccaaaatcaacccttggtaattggatgaacgaaattcgtcgg
ttttgtcctgtcctacgcgctgtgaaattccttggtaatcctgaggagaggagacatatt
cgagatgacctgttagttgctgggaaatttgatatttgcgtcacaagctttgagatggcc
atcaaagaaaagacagcacttcgtcgttttagctggcgttatattatcatcgatgaagcg
catcgaatcaagaatgagaattcacttctttctaaaaccatgagactttttagcaccaat
tatcgacttcttatcacgggaaccccacttcagaataatctccatgaactgtgggctctt
ctcaattttcttctgcctgaggtttttagttcagcagagacttttgatgaatggtttcaa
atttctggtgagaatgatcagcaagaagttgttcaacaacttcacaaggttcttcgacca
tttcttcttcgtagactgaaatcagatgttgagaaaggcttaccaccgaagaaggagacg
atacttaaagttggcatgtctcagatgcaaaaacaatactacaaggctttattgcagaag
gatcttgaagcagttaatgctggtggagaacgcaaacgtttgctaaacattgcaatgcaa
cttcgtaaatgctgcaatcacccttatctattccagggtgcagagcctggtcccccttat
accacaggagatcaccttataacaaatgctggtaagatggttctcttggataaattgctt
cctaagctgaaggaacgtgattcgcgggttctgatattctctcagatgacaaggcttttg
gatattcttgaggattatttaatgtatcgcggttatctctattgccgtattgatggaaat
actggtggggatgaacgagatgcctccatagaagcctacaacaagccaggaagtgagaaa
tttgttttcctgttatcgactagagccggagggcttggtatcaatcttgctactgcagat
gttgtgatcctttatgatagtgactggaacccgcaagttgacttgcaagctcaggatcgt
gctcataggattggtcaaaagaaagaagttcaagtgtttcgattctgcactgagtctgct
attgaggagaaagtgattgagagagcttacaagaagttggcgcttgatgccctggtaatt
caacaagggcgattggcagagcagaaaactgtcaataaggatgagttgcttcaaatggtt
agatatggtgctgagatggtgttcagttctaaagatagcacaatcacagacgaggatatt
gatagaatcattgccaaaggagaggaggcaacagctgaacttgatgccaagatgaagaaa
tttacagaaaatgcaatacagtttaaaatggatgacagtgctgacttctatgattttgat
gatgaaaataaggatgagaacaagcttgattttaagaaaattgtgagcgacaattggaat
gatccaccaaagcgggagagaaagcgcaactactctgaatctgaatactttaagcaaaca
ttgcggcaaggtggtccagctaaacctaaagagcctagaattccgcgcatgccccagttg
cacgatttccagttcttcaacattcagagattgaccgagttgtatgaaaaggaagtacgt
tatctcatgcaaacacatcagaaaaatcagttgaaagacacaattgatgttgaagaacca
gaaggtggtgatcccttaactgctgaagaagtagaagaaaaggagcaattattggaggag
ggcttctccacatggagtagaagagacttcaatactttccttcgggcttgtgagaagtat
ggccgtaacgacataaaaagcattgcctctgagatggaaggaaagacagaggaagaagtt
gaaagatatgccaaagtattcaaagagcgatacaaggaactgaacgactatgatagaatc
attaagaacattgagaggggagaggcaagaatctctaggaaagatgaaatcatgaaagcc
atcggaaagaaactggatcgctacagaaacccttggcttgaactgaagatacaatatggt
cagaacaaagggaagctgtacaatgaagagtgcgatcgtttcatgatctgcatgatccac
aaacttggttatgggaattgggatgagctaaaggcagcattcaggacatcgcctttgttc
aggtttgactggtttgtgaaatcccgcacgagtcaggaacttgcaagaagatgcgacact
ctgattcgactgatcgagaaagaaaaccaagagtttgatgaaagagagaggcaggcccgt
aaagaaaagaagctcgcaaagagtgcaacaccatcaaagcgaaccgtaggaagacaagca
agtgagagtccttcatcgacgaagaagcgaaagcacctctcgatgagatga
DBGET
integrated database retrieval system
