Camelina sativa (false flax): 104744924
Help
Entry
104744924 CDS
T05044
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat04120
Ubiquitin mediated proteolysis
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104744924
04120 Ubiquitin mediated proteolysis
104744924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
csat03110
]
104744924
04131 Membrane trafficking [BR:
csat04131
]
104744924
04121 Ubiquitin system [BR:
csat04121
]
104744924
Enzymes [BR:
csat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104744924
Chaperones and folding catalysts [BR:
csat03110
]
Other chaperones and cochaperones
Others
104744924
Membrane trafficking [BR:
csat04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104744924
Ubiquitin system [BR:
csat04121
]
Ubiquitin ligases (E3)
U-box type E3
104744924
Multi subunit type E3
STUB1-CHIC2 complex
104744924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
TPR_8
TPR_14
ANAPC3
TPR_12
zf-NOSIP
zf-Nse
TPR_9
Motif
Other DBs
NCBI-GeneID:
104744924
NCBI-ProteinID:
XP_010464358
LinkDB
All DBs
Position
15:complement(3053866..3056192)
Genome browser
AA seq
328 aa
AA seq
DB search
MLEKLRGFFSSETLREILRNPPPPHKSQREVLGGKEKYLFRLPSEMVTGVGSAMAERLKE
DGNNCFKKERFGAAIDAYTEAIALCPNIPAFWTNRALCHMKRKDWTKVEEDCRKAIQLVH
NSVKAHYMLGLALLQKKEYTSGVKELQRALDLGRGADPTGYMVEDIWEELSKAKYMEWEL
LSARRSWELNSLKETCEAALNQQRALDMSRTEEEERIESSQEAYIAHTERLKSLERVFEK
AAEEDKPSEVPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGNFDPITREKLEP
SKLVPNLAIKEAVAAYLEKHVWAYKIGC
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagaaattacgcggcttcttctcttctgaaacactccgggagattctacgaaac
cccccgccgccgcataagtcacagagggaagttttaggaggaaaggagaaatatttgttt
cgattgccgtcggagatggttacaggcgtgggctccgccatggcggaacggttaaaggaa
gacggaaacaattgctttaagaaagaacgttttggtgctgccattgacgcttacaccgag
gcaatagccttgtgtccaaatattcctgctttttggacaaatcgagcactttgccacatg
aagcgaaaggattggactaaggttgaagaggattgtcgcaaggctattcagcttgtccac
aattccgtcaaggcccactacatgctaggacttgcattattgcagaagaaagaatatacc
agtggagtcaaagagttgcaaagggctttagatcttggaagaggtgcggatccaacagga
tacatggtagaagatatatgggaagagctttctaaagcaaaatacatggagtgggaactg
ctttctgcgaggcgctcgtgggaattgaatagtttgaaggaaacttgtgaggctgctcta
aatcaacaacgtgctttagatatgtctagaacagaagaagaagagagaatagagtcctct
caggaagcctacattgcccatactgagcgtttgaaatctcttgaacgtgtatttgagaag
gctgcggaagaagataaaccatctgaggtgccagattatttatgttgcaacataactctt
gagattttccgagatcctgtcatttctccgagtggggttacatatgaaagagcagcaatc
ctcgaacatcttaagaaggtggggaactttgatcctataacgcgtgaaaaacttgagccg
tccaagctcgttccaaatctagctataaaagaggcagtggctgcgtatctagaaaaacac
gtctgggcttacaagattggttgctga
DBGET
integrated database retrieval system
