Camelina sativa (false flax): 104744977
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Entry
104744977 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104744977
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104744977
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104744977
NCBI-ProteinID:
XP_010464425
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Position
15:complement(3215101..3216711)
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AA seq
396 aa
AA seq
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MGAYFGVSTILIICLLGISANAAVFPIGSPSGSDITQALLKAFTAACQCPSPSKVVIPKG
EFKLGEIEMRGPCKAPIEITIQGTVKADGNAIQGKDKWVVFGNINGFKLNGGGAFDGEGN
ASWRVNNCHKTFLCKKLPISIRFDFVLNSEIRDISSIDAKNFHINVLGAKNMTMNNIKII
APEDSPNTDGIHLGRSDGVKILNSFISTGDDCISVGDGMKNLHVEKVTCGPGHGISVGSL
GRYGHEQDVSGIRIINCTLQQTDNGLRIKTWPSAACSTTASDIHFQDIILKNVNNPILID
QEYCPWNQCNKQKPSTIKLVNISFKNIRGTSGNKDAVKLLCSRGYPCQNVEIGNVDIKYT
GADGPATFQCSNVSPKLSGIQNPKACSAPVTKAPNM
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcatactttggagtttctacaattttaattatctgtttgttgggaatttcagcc
aatgctgcggtattccccattggttcaccgtcaggttctgatattactcaggcacttctg
aaagcattcacagcggcatgccaatgtccttcaccaagcaaagtggtgatcccaaaagga
gagttcaagcttggtgagatcgagatgaggggtccatgcaaagctccaatcgagatcacc
attcaaggtactgtcaaagctgatggtaacgctatccaaggcaaggataaatgggtcgtc
ttcggcaacatcaatgggtttaagttgaacggaggtggagccttcgatggtgaaggtaat
gcatcttggagggtcaataactgccacaagactttcctgtgcaagaaacttcccatcagc
ataaggtttgatttcgtgttgaactctgagatcagagacatatcctcaattgatgccaag
aacttccacatcaacgtcctgggagcaaagaacatgaccatgaataacatcaagatcatt
gccccagaagatagtcccaacactgatgggatccatttgggaagaagtgacggagtcaag
atccttaactctttcatctccaccggagacgattgcatctctgtcggagatgggatgaag
aaccttcacgtcgagaaagttacatgcggtccgggacacggaattagtgtcggaagcctt
ggaaggtacggacacgagcaagatgttagcggcattaggatcatcaactgtaccctccaa
cagactgacaacggactaaggatcaagacatggccttctgcagcttgctccaccaccgcc
tccgatatccatttccaggatatcatcctcaagaacgtcaacaacccaatcctcattgac
caagagtactgcccttggaaccagtgcaacaagcaaaaaccatcaacgattaagttggtg
aacataagcttcaagaatatcagaggaacatcagggaacaaggacgcggtgaagctactt
tgcagcaggggatatccgtgccagaacgtcgagattggaaacgttgatattaaatacact
ggagcagatggtccagccactttccagtgctcaaacgtcagccccaagctttcgggaatt
cagaaccctaaagcttgcagtgctcccgtgaccaaggcacccaacatgtag
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