Camelina sativa (false flax): 104744978
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Entry
104744978 CDS
T05044
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00040
Pentose and glucuronate interconversions
csat01100
Metabolic pathways
Module
csat_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104744978
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
104744978
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Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
104744978
NCBI-ProteinID:
XP_010464426
UniProt:
A0ABM0W1N2
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Position
15:complement(3218034..3219975)
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AA seq
398 aa
AA seq
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MGSYIGISTIFVLCLVGFSANAHEVFNVNAPPGSDITQALLKAFTAACQCTAPSRVVIPK
GEFKLCEIIMTGPCKAPIEINLLGTLLADGSNIHHGKDKWVVFRKINGFKLNGGGTFDGE
GSAAWRVNNCHKTSNCKKLPISIRFDFVTNAEIRDISSVDSKNFHVNVIGAMNMTFDNVK
ILAPAESPNTDGIHLGRSDGVSIINSRISTGDDCISVGDGMVNLLVKNVVCGPGHGISIG
SLGRYPHEQNVRGIKVINCTVQETDNGLRIKTWPTAACSTVASGIHFEDIILKNVSNPIL
IDQEYCPWNQCNKQKSSSIKLIDVSFTNIRGTSGNKDAVKLLCSKGYPCENVVVGNINIE
YTGRDGPATFMCSNVKPRLVGIQNPKACNTPPVLTQPK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatatatcggaatttctacaattttcgttctatgtctggtgggattttcagcc
aatgctcatgaggtgtttaacgttaatgctcctccaggttctgatatcactcaggcactt
ttaaaagcattcacagcggcatgccaatgtacggcaccgagcagggtggtgatcccaaaa
ggagagttcaagctttgtgagatcattatgacagggccatgcaaagctccaatcgagatc
aacttgctaggcactcttcttgctgacggaagtaacatccaccacggaaaggataaatgg
gtcgtcttccgcaaaattaatgggtttaagttgaacggaggtggaaccttcgacggtgaa
ggtagcgcagcttggagggtcaataactgtcacaagactagcaattgcaagaaacttccc
atcagtattagatttgatttcgtgacgaacgctgagataagagacatatcctcagtggat
tccaagaacttccacgtcaacgtgatcggcgccatgaacatgacctttgacaacgtcaag
atcttggctccagcagagagccctaacaccgacgggatccacttgggaagaagtgacgga
gttagcatcatcaactctaggatctccaccggagatgactgtatctccgtcggggacggg
atggtgaatcttctcgtgaagaatgtcgtgtgcggtcctggacacggtatcagtattgga
agccttggaaggtacccacacgagcagaacgttaggggcattaaggtcatcaactgtacc
gtacaagagactgacaacggcctcagaatcaagacttggcccaccgcggcttgctccacc
gtcgcctccggtattcattttgaggacatcatccttaaaaacgttagcaacccaatcctc
atcgaccaggagtactgtccttggaaccagtgcaacaagcaaaaatcttcatccattaag
ctgatagacgtaagcttcaccaatattagagggacatcaggaaacaaggatgcagtgaag
ctattgtgcagtaaaggttatccgtgtgagaacgttgtggttggaaacattaatattgag
tacactggacgcgatggtccagccactttcatgtgctcaaatgtaaagcctaggcttgtg
ggaattcagaacccaaaggcttgtaacaccccaccagtattgacccaacctaagtaa
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