Camelina sativa (false flax): 104745161
Help
Entry
104745161 CDS
T05044
Name
(RefSeq) cell division control protein 48 homolog A-like isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
csat
Camelina sativa (false flax)
Pathway
csat04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104745161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104745161
03009 Ribosome biogenesis [BR:
csat03009
]
104745161
04131 Membrane trafficking [BR:
csat04131
]
104745161
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104745161
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
104745161
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104745161
Membrane trafficking [BR:
csat04131
]
SNARE
SNARE associated proteins
Others
104745161
Autophagy
Aggrephagy
Other aggrephagy associated proteins
104745161
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104745161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_17
AAA_28
ATPase_2
Parvo_NS1
AAA_18
IstB_IS21
Vps4_C
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
AAA_lid_PRS2_C
TsaE
AAA_24
DUF815
Zeta_toxin
Zot
Motif
Other DBs
NCBI-GeneID:
104745161
NCBI-ProteinID:
XP_010464643
LinkDB
All DBs
Position
15:3918638..3923948
Genome browser
AA seq
809 aa
AA seq
DB search
MSAPAESSDSKSKKDFSTAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDT
ILIKGKKRKDTVCIALADETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHI
LPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVV
APDTEIFCEGEPVKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKP
PKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNA
PSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPAL
RRFGRFDREIDIGVPDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYVGADLAALCTE
AALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWN
DIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA
NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSGGGGDGGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNI
FKAALRKSPIAKDVDIGALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKEKRRSDN
PEAMEEDGVDEVSEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFEN
STGSGATTGVADPFATSAAAAADDDDLYN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccagctgaatcttcagactcgaaatcgaagaaagatttcagtactgctatt
ctcgagaggaagaagtctccgaaccgtcttgtcgtcgatgaagctatcaacgatgataac
tccgttgtttcccttcaccctgctaccatggagaagcttcagctcttccgtggtgatacc
attctcatcaagggtaagaaaagaaaggacactgtgtgcattgctcttgctgatgaaaca
tgtgaggagccaaagatccggatgaacaaagttgtcagatctaacttgagggttagactc
ggagatgttatttctgttcaccaatgcccagatgtcaagtacggaaaacgtgttcacatc
ttgcctgttgatgataccgttgaaggggtcactggaaacctctttgatgcttacttgaaa
ccttatttccttgaggcataccgccccgtgaggaagggtgatctcttcctagtcagagga
ggaatgaggagtgtggagttcaaagttatagagaccgatcctgctgaatactgtgtggtt
gctccagacacagagattttctgtgagggtgagcctgtgaagagagaggatgaagaaagg
ctagatgatgtaggttatgatgatgttggtggtgtcagaaaacagatggctcagatcagg
gaacttgttgaacttccattgaggcatccacaactattcaagtccattggtgttaagcca
ccaaagggaatcctgctctatggacctcctgggtctggaaagactttgattgctcgggct
gtggctaatgaaactggtgccttcttcttttgtatcaatggaccagagatcatgtctaaa
ctggctggtgagagtgagagcaacctgaggaaagcatttgaggaggctgagaaaaacgcg
ccttcgatcatcttcattgatgagattgactctattgcaccaaaaagagagaagacaaat
ggagaggttgagaggaggattgtgtctcagctccttacactcatggatggactcaaatcg
cgtgctcatgttattgtcatgggagcaaccaatcgtcccaacagtattgacccagctctt
agaaggtttggaagatttgatagggagatcgatatcggggttcctgacgaaattggacgt
cttgaagtgctgaggatccatacaaagaacatgaagcttgctgaagatgtggatctcgaa
aggatctcaaaggacacacatggttacgttggtgctgatcttgcagctctgtgcacagag
gctgccttgcaatgcatcagggagaagatggatgtgattgatttggaagatgactccata
gatgctgaaatcctcaattccatggcagtaactaacgagcacttccacactgctctcgga
aacagcaacccatctgcacttcgtgaaaccgttgttgaggttcccaatgtctcgtggaat
gatattggaggtcttgagaatgttaagagagagctccaggagactgttcaatacccagtc
gagcacccagagaagtttgagaaattcggtatgtctccgtcaaagggagtccttttctac
ggtcctcctggatgcgggaaaaccctattggccaaagctattgccaacgagtgccaagcc
aacttcatcagtgtcaaaggtcctgagcttctgactatgtggtttggagaaagtgaagca
aatgtccgagaaatctttgacaaggcccgtcaatccgctccatgtgttctcttctttgat
gaactcgactccattgcgactcagagaggaagcggaggcggtggcgatggaggcggtgct
gcagatagagtgttgaaccagcttttgactgagatggatggaatgaatgccaagaaaacc
gttttcatcatcggagcaaccaacagaccagacattattgattcagctcttcttcgtcct
ggaaggctcgaccagctcatttacattccactaccagacgaggattcccgtctcaatatc
ttcaaggccgccttgaggaaatctcctattgctaaagatgtagacatcggtgcacttgct
aaatacacacagggattcagtggtgctgatatcactgagatttgccagagagcttgcaag
tacgccatcagagaaaacattgagaaggacattgaaaaggagaagagaaggagcgataac
ccagaggctatggaggaagatggtgtggatgaagtttcagagatcaaagctgcacacttt
gaggagtcgatgaagtatgctcgtaggagtgtaagtgatgcagacatcaggaagtaccaa
gcctttgctcagactttgcagcagtctagagggttcggttctgaattcaggttcgagaat
tctactggttcaggtgcaaccactggagtcgcagatccgtttgccacgtctgcagccgct
gctgcggatgatgatgatctctacaactag
DBGET
integrated database retrieval system
