Camelina sativa (false flax): 104745398
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Entry
104745398 CDS
T05044
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104745398
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csat01002
]
104745398
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csat04121
]
104745398
Enzymes [BR:
csat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104745398
Peptidases and inhibitors [BR:
csat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104745398
Ubiquitin system [BR:
csat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104745398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
104745398
NCBI-ProteinID:
XP_010464921
UniProt:
A0ABM0W2X4
LinkDB
All DBs
Position
15:complement(5100372..5109753)
Genome browser
AA seq
1115 aa
AA seq
DB search
MTMMTPPPLDQQEDEEMLVPNPDLVEGPQPMEVAQTETAATTVENPPAEDPPSLKFTWTV
PMFTRLNTRKQYSEVFVVGGYKWRILIFPKGNNVDHLSMYLDVADASSLPYGWSRYSQFS
LAVVNQVHSRYSIRKETQHQFNARESDWGFTSFMPLSELYDPTRGYIVNDTVLIEAEVAV
RKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTAS
IPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQKLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLEG
DNKYHAEGHDLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
EDGKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDV
KRALEEQYGGEEELPQNNPGFNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEH
LRVRLKKEQEEKEDKRKYKAQAHLFTTIKVARDDDIAEQIGKNIYFDLVDHEKVRSFRIQ
KQTPFQQFKEEVAKEFGVPVQQQRFWIWAKRQNHTYRPNRPLLPNEELQTVGQIREASNK
ANNAELKLFLEIERGPDDRPISPPEKSHEDILLFFKLYDPVNAVLRYVGRLMVKSSSKPM
DIVGQLNKMAGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICYQKPLRI
QESECLYPDVPSFLEYVQNRELVRFRTLEKPKEDEFILELSKLHTYDDVVERVAEKLGLD
DASKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLK
TLKVAFHSATKDEVVIHNIRLPKQSTVGDVINELKTKVELSHQDAELRLLEVFFHKIYKI
FPSTERIENINDQYWTLRAEEIPDEEKNIGPNDRLIHVYHFTKEPGQNQQVQNFGEPFFL
VIHEGETLEEVKTRIQKKLHVPDEDFAKWKFASFSMGRPDYLQDTDVVYNRFQRRDVYGA
WEQYLGLEHIDNAPKRAYAANQNRHAYEKPVKIYN
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgccgccgcttgatcagcaggaagacgaggaaatgcttgtaccg
aatccggatttggtcgagggacctcagcctatggaagttgcccaaactgagactgctgct
accactgtggagaatccgccagccgaggatcctccaagtctgaaattcacgtggaccgtc
cctatgttcactaggctcaataccaggaagcaatactctgaagtatttgttgttggaggt
tataaatggcgtatattgatttttcccaaaggaaacaatgttgaccatttgtccatgtac
ttggatgttgctgacgcgtccagtttgccgtacgggtggagcagatattcacagttcagt
ctggctgtagtgaatcaagttcacagcagatattccatcagaaaagagacgcaacatcaa
ttcaacgcaagagaaagcgattgggggtttacatcattcatgcctctcagcgagctctat
gatcccactcgagggtatatagtgaatgacactgttctgattgaagctgaagttgctgtg
cgtaaagttcttgattactggtcatatgactcaaagaaagagactggttttgttggactt
aaaaaccaaggtgctacctgttacatgaattctctcctgcagacgttataccacatacct
tacttcagaaaggctgtgtatcacatgccaacgactgaaaatgatgcaccgaccgctagt
atcccattggcgctccaaagtttgttttacaaacttcagtataatgacaccagtgtagcc
acaaaggagctgacaaaatcgtttgggtgggatacatatgattctttcatgcaacatgat
gtccaagaactcaaccgagttctctgtgaaaagctcgaggacaagatgaagggaactgtt
gtggaggggacaatacaaaagctatttgagggtcaccacatgaattacattgagtgcatt
aatgtagattacaaatctactcgaaaagaatcattctatgacctccagcttgatgttaag
ggctgcaaagatgtatatgcttcttttgacaagtatgttgaagtcgaacgccttgaagga
gacaacaaataccatgcagaaggacatgatttgcaggatgcaaaaaaaggtgttctattc
atagactttccaccagtgcttcaacttcagctcaagaggtttgaatacgattttatgcgg
gacacaatggtgaagatcaatgatcggtatgagtttcctctgcaactggatctcgataga
gaggatggaaaatatttatcccctgatgcagacaagagtgtccgcaatctctacaccctc
cacagtgtcttggttcatagcggaggagtgcatggagggcattattatgcttttattagg
ccaacactttctgatcagtggtataaatttgatgatgaacgggtaacgaaggaagatgtg
aaaagggcactggaagagcaatatggtggtgaagaagagttaccgcagaataatcctggt
ttcaataatccacctttcaaattcacaaaatactcgaatgcgtacatgcttgtttatatt
cgggaaagtgacaaggataaaataatctgcaacgttgatgaaaaagacattgcggaacat
ttgcgggtgaggctgaaaaaagaacaagaagaaaaggaagataaaagaaaatacaaggct
caagctcaccttttcacgacaatcaaggtcgcaagagatgatgacattgctgagcaaatt
ggaaagaatatttattttgatcttgttgatcatgaaaaagttcggagttttagaatccag
aaacaaaccccctttcaacagtttaaggaagaggtagccaaagagtttggcgtcccggtt
caacaacagcggttctggatctgggcaaagcgtcaaaaccatacttatcgtcccaatcgt
cccctgttacctaatgaagaattacagacggttggacaaataagagaggcatctaacaag
gcaaacaatgctgaactgaagctgtttttggaaatagagcgcggaccggatgaccgccct
atttctcccccagaaaaatctcatgaagatattcttcttttctttaagctctatgaccct
gtgaacgcagtactaagatatgttggcaggctcatggtgaaaagttccagtaagcccatg
gatatagtagggcaactgaataaaatggccggctttgcccctgatgaggaaatagaactt
tttgaggaaataaagtttgaaccttgtgtaatgtgcgaacatctagataagaagacttct
ttcagactgtgccaaattgaagatggagatatcatttgctatcagaaacctcttcgtatc
caggagagtgaatgtctatacccagatgtgccatcatttttggagtatgtacagaatcga
gagctggtgcgttttcgtacactggaaaaaccaaaagaagacgagtttattctggagttg
tcaaagctgcacacttatgatgatgttgtcgaaagagtggctgagaagcttggccttgat
gatgcatcgaaacttaggcttacatctcacaattgctactcccagcaacccaagcctcag
ccaatcaaataccgtggagtagatcatctttcagatatgttagttcactataatcagacg
tctgacattttgtattatgaagttctggacattcctcttccagaattgcaaggtcttaag
actttaaaagttgctttccatagcgccacaaaggatgaagtggttattcacaatatcaga
ctacctaagcagagtactgttggagatgttattaatgaacttaaaacaaaggtggaactt
tcgcatcaagatgcagaactgaggttacttgaggtctttttccacaagatctacaagata
tttccatctactgaaagaattgagaacatcaatgaccagtactggactttacgggcagag
gagatacctgacgaagagaagaatattggtcccaatgatcggttaatccatgtatatcat
tttactaaagagcccggacaaaatcagcaagtacaaaatttcggcgagcccttctttttg
gtaatccatgaaggtgaaactttagaagaagtcaagacccgtatccaaaagaaacttcat
gtccctgatgaggactttgccaagtggaagtttgcatcattttcaatgggacgacccgat
tacttgcaggacacagatgtcgtttataatcgctttcagagaagagatgtgtacggtgcg
tgggagcagtatcttgggttggagcacattgataatgctcctaaaagggcttatgctgca
aatcagaaccgacatgcatatgagaagccggtgaaaatatacaattag
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integrated database retrieval system
