Camelina sativa (false flax): 104745409
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Entry
104745409 CDS
T05044
Name
(RefSeq) rRNA biogenesis protein RRP5-like
KO
K14792
rRNA biogenesis protein RRP5
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csat03009
]
104745409
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
90S particles
Other 90S particles
104745409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
OB_RRP5_4th
S1
Spt6_S1
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
104745409
NCBI-ProteinID:
XP_010464942
LinkDB
All DBs
Position
15:complement(5172446..5179171)
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AA seq
739 aa
AA seq
DB search
MGVPSSKKIANGKRHDSTKSFKPTKKPFKKTKDDLAARSEAALQLEDVPDFPRGGGSSLS
RKEREKIYEEVDAEFDADERVSKKSKGGKSKKKKIPNDADDLGLLFGGLTGKRPRYANKI
TTKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEASDFTDLGIEDDENELLGDIF
SVGQLVPCIVLQLDDDTKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSVEDHG
YILHFGLPSITGFIEICDDGNQKSRMKTGQLIQGVVTKIDRERKIIRLNSDPDSVAKCLT
KDLNGMSFDLLIPGMMINARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYS
QNKTVNARILFIDPSSRAVGLTLNPHLVCNKAPPLHVSSGGIFDEAKVVRIDKSGLLLEL
PSKPASTPAYVSTYDAAGDEVKKLEKKYKEGNHIRVRILGLKQMEGLAIGTLKESAFEGP
VFSHSDVKPGMVTKAKVISVDSFGAIVQFPGGLKAMCPLRHMSEFEVTKPRKKFKVGAEL
VFRVLGCKSKRITVTYKKTLVKSKLPILGSYTDATEGLVTHGWITKIEKHGCFVRFYNGV
QGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAAHGSRRITLSLMIKPASVSEDDSIKL
GSIVSGIIDSITSQAVIVRVKSKGVLKGTISAEHLADHHEQAKLMKSLLRPGYELDKLLV
LGMFINIVANSSCIYPSHI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgggagtaccgtcgtcaaagaaaattgctaatggaaaacgtcacgattctacaaagtcc
tttaaaccaacgaagaaaccgtttaagaagacgaaggacgatttagctgctaggtctgaa
gccgctctacagctcgaagatgttcctgacttccctcgaggtggaggtagttctctgagt
agaaaagagcgtgagaaaatttatgaagaagtggatgctgagtttgatgctgatgagcgt
gtttctaagaagagtaaaggtggaaagtctaaaaaaaagaaaatccctaacgatgcagac
gatttgggattgctttttggcggccttactggcaaaaggccaagatatgccaataagatt
accactaagaatatttcccctggaatgaagcttttgggagttgttactgaagtaaaccag
aaggatattgtaattagtcttccaggaggattacgtggattagtccgcgcaagtgaggcg
tcagattttacagatcttgggattgaggacgatgaaaatgaactccttggagacattttt
tcagtgggtcagcttgttccctgcattgtattgcaattagatgatgatacgaaggaggcg
ggcaaaagaaaaatatggctttcattgcgactttctttattgcacaagggattcagtttt
gattcttttcaactagggatggttttctctgccaatgtgaaaagcgtcgaagaccatggt
tatatacttcactttggattaccttctatcacaggatttatcgaaatatgcgatgatgga
aaccagaagtcaagaatgaagactgggcagcttattcagggtgtggttacaaagatcgat
agagaacgtaaaattattcgtcttaattctgacccagattcagtggcgaagtgtctgacc
aaggatcttaatggcatgtcctttgatcttctcatccccggaatgatgattaatgctcgt
gtgcaatcagttcttgagaatgggatactgttcgattttcttacttactttaacggaacg
gttgatctcttccatctaaaaaatccattgtctaacaaaagctggaaggatgagtatagt
cagaataagacggttaatgctagaatattgtttatcgatccatcatctagagctgttggt
ttaacattgaaccctcatcttgtttgtaacaaggctcctccgttgcatgtttctagcggc
ggcatattcgacgaagcaaaagtagttcgtattgataaatcaggccttcttctggaactt
ccttctaagcctgcatcaactccagcatacgttagcacatatgatgccgcaggagatgaa
gtaaagaaactggaaaagaagtataaggaaggaaatcacatccgtgttcgaatactcggc
cttaagcagatggaggggttggccatagggactctaaaggaaagcgcctttgaaggtcca
gttttctcccactcagatgtcaagcctggtatggtgacaaaggccaaagtcatatctgtt
gattcatttggtgccattgtgcaatttcccggtggtctcaaagcgatgtgcccacttcgg
catatgtctgagtttgaagttacgaagccgaggaaaaaattcaaggttggagctgaatta
gtattccgtgtgcttggctgcaagtcaaagagaataactgttacctacaaaaaaactctt
gtgaagtcgaaacttccaattttgggttcttacactgatgcaactgaaggtctagtgacg
catggctggataacaaagattgaaaagcatggatgctttgttcgcttttataatggagtg
caaggatttgttcccagatttgaacttggtttagagcctggaagtgatccagattccgtg
tttcatgtcggagaggttgtcaaatgtagagtaaccagtgcggctcatggttctcgaagg
atcacccttagtttgatgataaagccagcaagtgtttctgaagacgattcaatcaagtta
ggtagcattgtatctgggataattgatagtataactagtcaggcagtcattgtccgtgtt
aaatccaaaggagttctcaagggtacaatttctgctgaacatttagctgatcatcatgag
caagcaaaattaatgaagtcacttttaagacctggatatgagcttgataagctgctggta
ctaggtatgtttattaatattgttgcaaattcttcatgtatatatccttcacatatttaa
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