Camelina sativa (false flax): 104745477
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Entry
104745477 CDS
T05044
Name
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
csat04141
Protein processing in endoplasmic reticulum
csat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104745477
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104745477
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104745477
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104745477
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104745477
03009 Ribosome biogenesis [BR:
csat03009
]
104745477
03110 Chaperones and folding catalysts [BR:
csat03110
]
104745477
04131 Membrane trafficking [BR:
csat04131
]
104745477
03051 Proteasome [BR:
csat03051
]
104745477
03029 Mitochondrial biogenesis [BR:
csat03029
]
104745477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104745477
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
104745477
Spliceosome [BR:
csat03041
]
Complex B
Other components
Prp19 complex
104745477
Complex C
Prp19-CDC5 complex
104745477
Ribosome biogenesis [BR:
csat03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
104745477
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP70 / DNAK
104745477
Membrane trafficking [BR:
csat04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104745477
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
104745477
Proteasome [BR:
csat03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
104745477
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
104745477
Exosome [BR:
csat04147
]
Exosomal proteins
Proteins found in most exosomes
104745477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DACNG
Hydantoinase_A
Motif
Other DBs
NCBI-GeneID:
104745477
NCBI-ProteinID:
XP_010465032
LinkDB
All DBs
Position
15:complement(5420704..5423088)
Genome browser
AA seq
650 aa
AA seq
DB search
MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAKN
QVAMNPTNTVFDAKRLIGRRYSDPSVQSDLKHWPFTVKSGPAEKPMITVNYKGEEKQFSA
EEISSMVLIKMREIAEAFLGSPVKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEP
TAAAIAYGLDKKASSVGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFD
NRMVNHFVQEFKRKNKKDITGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFY
TTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSVHDVVLVGGSTRIPKVQQLLQDFF
NGKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLI
PRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQI
TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKK
KVDAKNALENYAYNMRNTIKDEKIASKLDAADKKKIEDAIDQAIEWLDGNQLAEADEFDD
KMKELESLCNPIIARMYQGAGPDMGGAGGMDEDAPAGGSGGAGPKIEEVD
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtaaaggtgaaggtccagctatcggtatcgatctcggtactacctactcttgc
gtcggtgtttggcaacacgaccgcgtcgaaatcatcgccaacgatcaaggcaaccgtacc
actccttcctacgttgctttcactgactccgagcgtctcatcggtgatgccgccaaaaat
caagtcgccatgaaccctaccaacaccgtcttcgatgctaaacgtctgattgggagaaga
tacagtgatccgtcggttcaatcggatttaaagcactggccattcacggttaaatccggt
ccagctgagaagcctatgatcacagtcaactacaagggagaggagaaacagttctctgcc
gaggagatctcttccatggttctcattaagatgcgggagattgctgaagctttccttggc
tctcctgttaagaacgctgttgttaccgtacctgcttatttcaacgactctcagcgtcag
gcgactaaggacgctggtgttatctctggtctcaacgtgatgcgtatcatcaacgagcca
accgctgctgcgattgcttacggtcttgataaaaaggcgtcgagtgttggcgagaagaat
gttttgatctttgatttgggaggtggtacttttgatgtttctttgcttacgattgaggaa
ggtatctttgaagtgaaggccacggctggtgacacgcatcttggtggtgaggacttcgac
aacaggatggttaatcattttgttcaggagtttaagaggaagaacaagaaggatatcact
ggtaacccgagagctttgaggaggcttaggacagcttgtgagagggctaagagaactctt
tcttctactgctcagacgactattgaaatcgactctttgtacgagggtattgatttctac
acaaccatcactcgtgctaggttcgaggagctcaacatggatttgtttaggaagtgtatg
gagccagtggagaagtgtttgagagatgctaagatggataagagcagtgttcatgatgtt
gtacttgttggtggctctacaagaatccctaaagtgcagcagttgttacaagactttttc
aatgggaaagagctctgtaaaagcattaacccggatgaagctgttgcttatggagctgct
gtccaagctgcgatcttgagcggggaagggaacgagaaggtccaagacttgttacttctt
gatgttactcctctgtccttgggtttggaaaccgccggtggggttatgactgttctgatt
ccgaggaacacaactattccgacgaagaaagagcagatcttctctacctattcagacaac
cagcctggtgttctgatccaagtctacgaaggggagagagcaaggacgaaggacaacaac
cttttgggaaagttcgagctcagcggtataccacctgctccacgaggtgttccccaaatt
acggtctgcttcgacattgacgccaatggtatcctaaacgtgtcggctgaggacaagacg
actggtcagaagaacaagatcacaatcacaaacgacaagggaaggctatcaaaggaagag
atcgagaagatggtacaggaagcagagaagtacaaggctgaggatgaagaacacaagaag
aaggttgatgcaaagaacgctctcgagaactatgcatacaacatgaggaacacgatcaag
gacgagaagatagcatctaagcttgatgcagctgacaagaagaagattgaagatgcgatc
gaccaagctattgaatggttggatggtaaccagctggcggaggcagatgagttcgacgat
aagatgaaggagctcgagtctctttgcaaccctatcattgctaggatgtaccaaggcgct
ggacctgatatgggtggtgctgggggaatggacgaagatgctcctgctggtggtagcggc
ggtgctggccccaagattgaagaagttgattaa
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