Camelina sativa (false flax): 104745598
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Entry
104745598 CDS
T05044
Name
(RefSeq) LOW QUALITY PROTEIN: chaperonin 60 subunit beta 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104745598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104745598
03110 Chaperones and folding catalysts [BR:
csat03110
]
104745598
03029 Mitochondrial biogenesis [BR:
csat03029
]
104745598
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csat04147
]
104745598
Enzymes [BR:
csat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
104745598
Messenger RNA biogenesis [BR:
csat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
104745598
Chaperones and folding catalysts [BR:
csat03110
]
Heat shock proteins
HSP60 / Chaperonin
104745598
Mitochondrial biogenesis [BR:
csat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
104745598
Exosome [BR:
csat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
104745598
Exosomal proteins of other body fluids (saliva and urine)
104745598
Exosomal proteins of breast cancer cells
104745598
Exosomal proteins of colorectal cancer cells
104745598
Exosomal proteins of bladder cancer cells
104745598
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
104745598
NCBI-ProteinID:
XP_010465189
UniProt:
A0ABM0W3J3
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All DBs
Position
15:5996752..6000271
Genome browser
AA seq
596 aa
AA seq
DB search
MASTFTATSSLGSLVAPNAIKLSSAASISSSSFGRRQNLCLRRSRPAIVCAAKDLHFNKD
GTTIRRLQSGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRXAAAKTNDLAGDGTTTSVVLAQGFIAEGVKVVAAGANPVLITRGIEKTAKALVH
ELKLMSKEVEDSELADVAAVSAGNNHEVGSMIAEAMSKVGRKGVVTLEEGKSAENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEFDNCKLLLVDKKITNARDLVGVLEDAIRGGYPILII
AEDIEQEALATLVVNKLRGTLKIAALKAPGFGERKSQYLDDIAILTGGTVIREEVGLSLD
KAGKEVLGNASKVVLTKEMTTIVGDGTTQEAVNKRVVQIRNLIEQAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK
STLENDEEKVGAEIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLMSDCVVVEIPEPEPVPAGNPMDNSGYGY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacgttcactgccacgtcttcccttggttccttggtagctcctaatgctatc
aagttgtcttctgcggcttccatttcttcaagctcttttgggaggagacagaatctgtgc
ctaagaaggtcccgtcctgctatagtctgtgcagccaaggacttgcatttcaacaaggat
gggactaccataaggagacttcagagtggtgttaataagcttgcggaccttgttggtgtc
acacttggaccaaaaggtagaaatgttgttcttgagagcaagtatggatccccaagaatt
gttaatgatggtgtcactgttgctagggaggtcgagttggaggaccctgttgagaacatt
ggtgcaaagcttgtaaggtaagcagctgcaaagaccaatgacttggctggtgacggtaca
acaacatctgttgttcttgcacaaggttttattgctgagggtgtcaaggtggtggctgca
ggtgcaaaccctgtattgatcactaggggcattgagaaaacagctaaggctttggttcac
gagctgaaactaatgtctaaggaggttgaagacagtgaactcgctgatgtggcagctgtt
agtgctggtaataaccatgaagtcggaagtatgattgctgaagcaatgagcaaagtgggc
aggaagggtgtggtgaccctggaggagggtaaaagcgctgagaacaacctttacgttgtg
gaaggaatgcaatttgaccgtggttatatctctccatactttgtgacagacagtgagaaa
atgtctgttgagttcgataactgcaagttgcttcttgttgacaagaaaattaccaatgca
agggatcttgttggtgttctagaggatgccattaggggcggatacccaatccttataatt
gcggaagatattgaacaagaagctttagctactcttgttgttaacaagcttagaggcaca
ttgaagattgcagctctcaaagctcctggatttggagagcgcaagagccaataccttgac
gatattgccattctaactggaggaactgtgataagagaggaagttggtctttcccttgac
aaagctggaaaagaggttctgggtaacgcttctaaggttgtcctgacaaaggagatgaca
acgattgtgggtgatgggaccactcaggaagcagtgaacaaacgtgttgtacagattaga
aatcttattgagcaagcggagcaagactacgagaaggagaaattaaacgagagaattgca
aaactctctggtggagttgctgtaattcaggttggagctcaaactgagacggagcttaaa
gaaaagaagctgagagtggaagatgctcttaatgcgacaaaggctgctgttgaggaaggt
attgtcgtcggtggtggttgcactctgctccggcttgcatccaaggtcgatgccatcaag
agtacccttgaaaatgatgaagaaaaggttggagcggaaatcgttaaaagagcactgagt
taccctctgaaattgatagccaagaatgctggtgtcaatggaagtgttgtcagcgagaag
gtgctagctaatgataatgtgaaatttggttacaatgctgcaacgggcaagtatgaagac
ctgatggctgcaggcatcatcgacccgacaaaggttgtgagatgttgcttggaacatgca
gcctcggttgcaaaaactttcctgatgtctgactgtgtggttgttgagatcccagagcca
gagccagttcctgctggcaaccccatggacaactcaggatatggatactaa
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