KEGG   Camelina sativa (false flax): 104746061
Entry
104746061         CDS       T05044                                 
Name
(RefSeq) WD repeat-containing protein 82-B-like isoform X1
  KO
K14962  COMPASS component SWD2
Organism
csat  Camelina sativa (false flax)
Pathway
csat03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104746061
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104746061
   03036 Chromosome and associated proteins [BR:csat03036]
    104746061
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104746061
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     104746061
    COMPASS/SET1 complex (yeast)
     104746061
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd NBCH_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_DCAF4 eIF2A Beta-prop_SCAP WDR90_beta-prop_4th Cytochrom_D1 Beta-prop_IFT140_1st KNTC1_N Beta-prop_WDR35_TULP_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 104746061
NCBI-ProteinID: XP_010465749
LinkDB
Position
2:complement(28981905..28984167)
AA seq 331 aa
MVVIFVQRERSEFHWNSAKNLYRAWNLAPFSETMISSIDFHKTSTYMVTASDDDSIRLYD
VATASCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHD
RVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLVFAIAFGG
YIRMFDTRMYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGYIHVLDSFRGTLLS
TYSVKPVAEASTLDATFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGIGGGDPPVIKW
APGSPMFVTGSSELSFVIPDLSKLPAYSIRK
NT seq 996 nt   +upstreamnt  +downstreamnt
atggttgtaatttttgtgcagagagagaggagcgagtttcactggaactcagcgaagaac
ttatacagagcatggaacctggcgccgttttcagagactatgatcagctccattgacttt
cacaaaacttctacttatatggtgactgctagtgacgatgactcaattcgtctctatgat
gttgctaccgcttcatgtctcaagacaattaatagcaaaaagtacggtgttgatcttgtt
tgcttcacttcccatcccaccactgtcatctactcttccagaaacggatgggacgactct
ctgaggcttctctctttgcacgataacaagtacttgcgttacttcaaaggacatcatgac
agagttgtttcgcttagcttgtgctctggtggggagtgcttcatctccggttctcttgat
cgaactgttttgctttgggatcaaagggtcgagaaatgccagggtctcttacgagtccaa
ggaaggcctgctgcagcttatgatgatcaagggttagtttttgcaattgcctttggtggc
tacataagaatgtttgatacccgtatgtacgaaaagggtccttttgaaatattttccgtt
ggtggtgatctttctgaggcaaacgttgtgaaatttagtaatgatggaaggctcatgctg
ctcacaaccatggatggttatattcatgtgcttgactcgtttcgtggaacactcctatcc
acatatagtgtgaaaccagtagctgaagcatcgacattggatgcaaccttcagtcccgaa
gggatgtttgttgtttcaggttcaggggatggtagtacccatgcatggggtgtaaggagc
ggaaaacaggtacatagttggatgggtataggcggtggtgatcccccagtcataaaatgg
gcaccgggaagtccaatgtttgtgacaggctcttcggagctttcatttgtaatcccggac
ttgtccaaattgccagcttactccataaggaaatag

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