KEGG   Camelina sativa (false flax): 104746102
Entry
104746102         CDS       T05044                                 
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
csat  Camelina sativa (false flax)
Pathway
csat03082  ATP-dependent chromatin remodeling
csat03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104746102
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    104746102
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csat01009]
    104746102
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csat03021]
    104746102
   03036 Chromosome and associated proteins [BR:csat03036]
    104746102
Protein phosphatases and associated proteins [BR:csat01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104746102
Transcription machinery [BR:csat03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     104746102
    SWI/SNF complex
     104746102
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    104746102
   PBAF complex
    104746102
   SWI/SNF complex
    104746102
SSDB
Motif
Pfam: SNF5 GP70
Other DBs
NCBI-GeneID: 104746102
NCBI-ProteinID: XP_010465806
LinkDB
Position
15:complement(8850068..8852550)
AA seq 240 aa
MKALGSSGWKGPVKFRMPTAENLVPIRLDIQSEGQRYKDAFTWNPSDPDNEVVVFAKRTV
KDLKLPSAFITQIAQSIQSQLSDFRAYEGQDMYTGEKIIPIKLDLRVNHTLIKDQFLWDL
NNFESDPEEFARTLCKDLGVEDPEVGPAVAFAIREQLYEIATQSVASAKESRLSKKSRRG
SDHGSASKASGLSMDLVKLFSFKSSVVRKRKDLDVYEPVVDLLTSEEVDALEAREERHAR
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaaggctttagggtctagtggttggaaaggtcccgtcaagttcaggatgcctactgct
gaaaacttggtacctattcgtttagacattcaatctgaaggtcaacgttacaaagatgct
ttcacttggaacccttcagacccggataatgaagtcgttgtctttgccaaaagaactgtt
aaagacttgaaacttccctctgcatttatcactcagattgcccaatctattcagtctcag
ctctcagattttcgggcatatgaaggacaagatatgtacactggtgaaaagatcatacca
atcaagcttgatctccgagttaaccataccctcatcaaagatcagttcttgtgggaccta
aacaattttgagagtgatcctgaggaatttgcgagaaccttgtgcaaggatttaggtgtt
gaagatcccgaagttggacctgctgttgcctttgcaataagggagcaactttacgagatt
gcaactcaaagtgtggcttcagctaaagagagtagattaagtaagaaaagccgcagagga
tctgatcatggttcagcgagcaaagcaagtggcctgtcaatggacttagtgaagttattc
agctttaagtccagtgtagttaggaaaaggaaagacttggatgtttatgaaccagtggtg
gatctgctaacaagtgaggaagttgatgcgcttgaagccagggaagaaagacatgcaagg
taa

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