Camelina sativa (false flax): 104746165
Help
Entry
104746165 CDS
T05044
Name
(RefSeq) actin-interacting protein 1-2-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
csat
Camelina sativa (false flax)
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csat04990
]
104746165
Domain-containing proteins not elsewhere classified [BR:
csat04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
104746165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
PD40
Beta-prop_SCAP
KNTC1_N
DUF5642
SipA_2nd
Motif
Other DBs
NCBI-GeneID:
104746165
NCBI-ProteinID:
XP_010465881
LinkDB
All DBs
Position
15:9167715..9170750
Genome browser
AA seq
610 aa
AA seq
DB search
MMELSETYACVPSTERGRGILISGDSKSDTILYTNGRSVVMLDLNNPLKVSIYGEHAYPA
TVARYSPNGEWIASGDVSGTVRIWGAYNDHVLKKEFKVLAGRIDDLQWSADGLRIVASGD
GKGKSLVRAFMWDSGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEGPPFKF
KLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYDGKTCEKLGELSPEDGHKGSIYAVS
WSPDGKQVITVSADKSAKVWDMSENGSGTLNTTLNCPGSSGGVDDMLVGCLWQNDHIVTV
SLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNTDYILSGSYDGLICKWMLGRGFS
GKLQRTQNTQIKCFAAHEEEIVTSGYDNMISRISYKDDQCTNEEAIDIGNQPKDLSLAPL
SPDLLLVTFESGVVFLRDGKVVSTINLGFTVTALAVTPDGTEAIVGGQDGKLHLYSVSGD
SLTEEAVLEKHRGAISVIRYSPDLSMFASADLNREAVVWDRVSREMKLKNMLYHSARINC
LAWSPNSSMVATGSLDTCVIVYEVDKPASSRMTIKGAHLGGVYGLGFADDSHVVSSGEDA
CIRVWSLTPQ
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctttccgaaacctacgcgtgcgtcccgtcaacggagagaggtcgagggatc
ctgatctccggtgactcgaagtccgatacaatcctctacactaatggtcgatccgtcgtg
atgctcgacctcaacaaccctttaaaggtatctatctacggggaacacgcttacccagct
actgttgcgagatactcacctaacggagagtggatcgcgtcgggtgatgtgtcgggtact
gttagaatctggggtgcttacaatgatcatgtgttgaagaaagagtttaaggttttggct
ggtcggatcgatgatcttcagtggtctgctgatgggttgaggatcgttgcttctggtgat
ggcaaagggaaatctcttgttcgtgctttcatgtgggattcaggatcaaatgtgggagag
tttgatggacattctaggagagttcttagctgtgctatcaagccaactagaccgttccgt
attgttacttgtggggaagattttctggtgaatttctatgaaggtcctcctttcaagttc
aagctctcaagcagagagcattccaactttgtcaactgtgtgaggtttgcaccagatgga
agtaagtttattactgttagttcagataaaaaggggattatatatgatggaaagacttgt
gagaaacttggagagctttcacctgaagatgggcataaaggtagcatctatgcagttagc
tggagtcctgatggtaaacaggtcatcactgtttctgcagacaagtcagccaaagtgtgg
gatatgtcagaaaacggtagcggaacattgaacacaacattgaattgtcctggatcatca
ggaggagtggacgatatgcttgttgggtgtctgtggcagaacgatcatattgtcactgtt
tctctaggtggcacgatcagcatattctcagcaagtgatcttgataaatccccctttcag
ttttcggggcatatgaagaacgtctcttccttagctgtcctcaaaggaaatactgactac
atattatctggtagttatgatggtctcatatgtaaatggatgctaggccgtggtttcagc
ggtaaattgcagaggacacagaacactcaaataaagtgctttgctgctcatgaagaagag
attgtgacctccggatatgacaatatgatatctaggatttcctataaagacgatcaatgc
acaaatgaagaggctattgacattggaaatcaaccaaaagatctaagccttgcaccactc
tcaccggatctacttctggtgacctttgagtcaggagttgtgtttctccgtgatgggaaa
gtagtgtcaaccatcaaccttgggttcactgtcactgctttggcagtaacacctgatgga
accgaagccatcgtcggtggccaagacggtaaactccatctgtattctgttagtggcgac
tcactcactgaggaagcagttctcgagaaacacagaggcgccatcagtgtcatacgttac
tctccggatctctctatgtttgcatcagctgatttgaacagagaagctgttgtgtgggac
agagtctccagagagatgaagctgaagaacatgttgtaccatagcgcacgcataaactgc
ttagcttggtctccaaacagcagtatggttgctacaggatccttagacacctgtgtgatc
gtgtatgaagtggacaaaccagcttcgtcaaggatgaccataaaaggagctcacttaggt
ggagtatatggtctgggttttgctgatgattcccatgtagtgagttctggtgaagatgct
tgtatccgcgtctggagcttaactccccaataa
DBGET
integrated database retrieval system
