Camelina sativa (false flax): 104746225
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Entry
104746225 CDS
T05044
Name
(RefSeq) DNA mismatch repair protein MSH2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
csat
Camelina sativa (false flax)
Pathway
csat03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104746225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csat03400
]
104746225
DNA repair and recombination proteins [BR:
csat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104746225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
DUF2465
Motif
Other DBs
NCBI-GeneID:
104746225
NCBI-ProteinID:
XP_010465956
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Position
15:complement(9611957..9616681)
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AA seq
937 aa
AA seq
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MEGNIEDQNKLPELKLDAKQAQGFLSFYKTLPNDSRAVRFFDRKDYYTAHGENSVFIAKS
YYHTTTALRQLGSGSNALSSVSISRNMFETIARDLLLERNDHTVELYEGSGSNWRLVKTG
SPGNIGSFEDVLFANNEMQDTPVVVSIFPNFQEGRCVIGMSYVDLTRRILGLAEFLDDSR
FTNLESSLIALGAKECIVPAESGKSNECKSLYDSLERCAVMITERKKHEFKGRDLDSDLK
RLVKGNIEPVRDLISGFDLATPALGALLSFSELLSDEGNYGNFTIRRYDIGGFMRLDSAA
MRALNVMESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLVDLNAIKTRLDIVQCF
VEEAGLRQDLRQHLKRISDVERLVRSLERRRGGLQHIIKLYQSTIRLPFIKTVLEQYTGE
FSSLISERYLKKLEALSDQDHLGKFIDLVEYSVDLDQLENGEYMISASYDTTLASLKDQK
ELLEQQIHELHKKTAMELDLQVDKALKLDKAAQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQSVVDDYKSCQKELVDRVVQTVTSFSEVFEDLALLLSEMD
VLLSFADLAASCPTPYCRPEVTSSDAGDLVLEGSRHPCVEAQDWVNFIPNDCRLMRGKSW
FQIVTGPNMGGKSTFIRQVGVIVLMAQVGSFVPCDKASISIRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVKKAPTLFATH
FHELTALAQANSEVAGNTVGVANFHVSAHIDTESRKLTMLYKVEPGACDQSFGIHVAEFA
NFPESVVSLAREKAAELEDFSPSSMIINNEESGKRKNREDDPEEVSRGAARAHKFLKEFA
AMPLDKMELKDSLQRVREMKDELEKDAADCQWLRRFL
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaatatcgaggaccagaacaagcttccggagctgaaactggatgcaaagcag
gctcaagggtttctctccttctacaaaaccctaccaaatgactcgagagctgttagattc
tttgatcggaaggattattatacagctcatggtgagaattcagttttcatcgcaaagagt
tattatcacacaaccactgctttaaggcagcttgggagtggttcaaatgctctttcaagc
gttagcatcagtaggaacatgtttgaaacgattgctcgggatcttctactggagcgtaat
gatcatactgttgagctttatgaaggaagtgggtcgaattggagacttgtgaaaacaggt
tctcctggaaacattggaagctttgaagatgttttgtttgcaaacaatgaaatgcaggac
acaccagttgttgtctccatatttccaaattttcaagagggcagatgtgttatcggaatg
tcctatgttgatctgactaggcgaattcttggactagctgagtttcttgatgatagccgc
ttcactaatctggagtcctcactgattgctctaggcgcaaaagaatgcattgttccagct
gaatccggaaaatccaatgaatgcaaaagcctgtatgattctcttgagaggtgtgccgtg
atgataacagaaaggaagaaacacgagttcaaaggacgagatttagattctgatctaaag
agactggtgaagggtaatattgaaccagttagagatttgatatccgggtttgaccttgcc
actcctgctctaggtgcattactctctttctctgaacttctctcggacgagggtaactat
gggaacttcacaatccgcagatatgatatcggtggattcatgagactcgactctgcagct
atgagggcgttgaatgtgatggagagcaaaactgatgctaataagaatttcagtttgttt
ggtctcatgaacagaacatgcactgcagggatgggtaagagactgcttcatatgtggctg
aagcaacctctcgtggatttgaatgcgatcaagacgagattagatatagttcagtgcttt
gttgaagaagctgggttaaggcaagatcttagacagcatctgaagcgaatctcagatgtt
gagaggcttgtgcggagtctcgagagaagaagaggtggcttacaacatattatcaaactc
tatcagtcaactataaggcttcccttcatcaaaacagttctggaacagtacactggagaa
ttctcatcactcatcagcgagagatacttgaaaaagctcgaggctttatcagaccaagat
cacctcggaaagttcatcgatttggtagagtactctgtagatcttgaccagctagaaaat
ggagaatacatgatatctgcaagctacgacaccacattagcatctctgaaagatcagaaa
gaattgctggagcagcagattcacgaattgcacaaaaagacggctatggaactcgatctt
caggtcgacaaggctctaaaacttgacaaagcagcgcagtttgggcatgtgtttaggatc
acgaagaaggaagagccaaagattaggaagaagctgacgacacagtttatagtgctggag
actcgtaaagatggagtgaagttcacaaacacaaagcttaagaaacttggggaccagtac
caaagtgttgtggacgattacaagagctgtcagaaggagcttgttgatcgtgtagttcag
accgttaccagcttctccgaggtctttgaggacttagcattgttgctctctgaaatggat
gttttgttaagctttgctgacttggctgccagttgccctactccatactgtaggccagaa
gtcacctcttcggatgctggagatcttgtattagaaggaagcagacatccatgcgtagaa
gctcaagactgggtgaattttataccaaatgattgcagacttatgagagggaagagttgg
tttcaaatagtaacaggacctaacatgggagggaagtccactttcattcgccaggttggt
gtcattgtgctgatggctcaagttggttcctttgttccttgtgataaagcatcaatttcc
atcagagactgcatctttgcccgtgtaggagcaggcgattgtcaactacgcggagtgtct
actttcatgcaagaaatgcttgaaactgcatccatattgaaaggcgctaccgacaagtca
ctgataattatcgatgaacttggtcgtggaacatcaacttatgatggttttggtttagca
tgggctatatgtgagcatctagttcaagtgaagaaagcaccaactctgtttgctactcac
ttccatgaacttactgccttggctcaagcaaactctgaggttgctggtaacaccgttggt
gtggcaaacttccatgtaagcgctcacattgacactgaaagccgcaaactcaccatgctt
tacaaggttgaaccaggggcctgtgaccagagctttgggattcatgtggcggaatttgcc
aacttccctgaaagcgtagtctcccttgcaagagagaaagctgcagaactggaagatttc
tctccgtcttccatgataatcaacaatgaggagagtgggaagagaaagaacagagaagat
gatccagaggaagtatcgagaggggcagcgcgagctcacaagtttctgaaagaatttgca
gcaatgccacttgataaaatggagcttaaagattcacttcaacgggtacgtgagatgaaa
gatgagctagagaaagatgctgcagactgccagtggctcaggcggttcctgtga
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