Camelina sativa (false flax): 104746355
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Entry
104746355 CDS
T05044
Name
(RefSeq) probable beta-D-xylosidase 5
KO
K15920
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat00520
Amino sugar and nucleotide sugar metabolism
csat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
104746355
Enzymes [BR:
csat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
104746355
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_3_C
Glyco_hydro_3
Fn3-like
Motif
Other DBs
NCBI-GeneID:
104746355
NCBI-ProteinID:
XP_010466113
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Position
15:complement(10653033..10656062)
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AA seq
781 aa
AA seq
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MSVRRFVNISLLVAALVSSLCESQKNFACDKNAPATAKYGFCNVSLSYEARAKDLISRLS
LTEKVQQLVNKATGVPRLGVPPYEWWSEALHGVSDVGPGVRFNGTVPGATSFPATILTAA
SFNTSLWLKMGEVVSTEARAMHNVGLAGLTYWSPNVNVFRDPRWGRGQETPGEDPLVVSK
YAVNYVKGLQDVHDAGKSRRLKVSSCCKHYTAYDVDNWKGIDRFHFDAKVTNQDLEDTYQ
PPFKSCVEEGDVSSVMCSYNRVNGIPTCADPNLLRGVIRGQWRLDGYIVSDCDSIQVYFD
DIHYTKTREDAVAIALKAGLNMNCGDFLGKYTENAVKLKKLNGSEVDEALIYNYIVLMRL
GFFDGDPKSLPFGHLGPSDVCSKDHQMLALEAAKQGIVLLENRGDLPLSKTAVKKLAVIG
PNANATKVMISNYAGVPCKYTSPLQGLQKYVPEKVVYELGCNDVKCGDQTLISAAVKAVS
EADVTVLVVGLDQTVEAEGLDRVNLTLPGYQEKLVRDVANAAKKTVVLVIMSAGPIDISF
VKNLSKISAVLWVGYPGQAGGDAIAQVIFGDYNPSGRLPETWYSQEFADKVAMTDMNMRP
NSTSGFPGRSYRFYTGNPIYNFGYGLSYSSFSTFVLSAPSFIHIKTNPILKLNKTTSVDI
STVNCHDLKIRIVIGVKNHGLRSGSHVVLMFWKPPKCSKSLVGGGVPQTQLIGFERVEVG
RSMTEKVTIEFDVCKELSLVDTNGKRKLVTGHHTLVIGSNSDQQIYHHLNVRLAGDSTVS
I
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtaagaagatttgtgaatatctctctgctagtagcagctctagtttcatcacta
tgcgagtctcagaagaactttgcatgtgataaaaatgcccctgcgacggctaagtacggt
ttctgtaacgtctcgttgtcgtatgaagcacgcgccaaagatttgatctcacgtctctcc
ctcacggaaaaagtccagcaactcgtaaacaaagccacaggagttccaaggctcggtgtt
cctccgtacgagtggtggtcggaagctctccacggcgtctccgacgttggaccaggggtg
cgtttcaacgggactgtgcctggagcgactagtttcccggcgacgatattaacggcagcg
agctttaacacatcgttgtggctaaaaatgggagaagtggtttctacggaggctcgagcg
atgcacaacgtaggacttgctggcctaacgtattggagtcccaacgttaacgtctttaga
gatccaagatggggtcgtggtcaagagacgccaggggaggatcctctcgttgtttcaaaa
tacgctgtgaactacgttaagggcttacaagacgttcacgacgccggaaaatcacggcgg
cttaaggtctctagctgctgcaagcattacactgcttacgatgttgataactggaaaggc
atcgatagattccacttcgacgccaaggtaactaatcaagacttggaagacacgtatcag
ccgccatttaagagctgtgtagaggaaggagatgtgagcagtgtgatgtgttcttacaac
agagttaatggtatcccaacttgtgcagaccctaatcttcttcgtggagttatccgaggc
caatggcgtcttgatgggtacatcgtttcggattgtgattccattcaggtctatttcgac
gacattcattacaccaagacacgtgaagacgcagttgctattgctctcaaagcaggtttg
aacatgaactgtggagattttctaggcaagtacacagagaatgcagtgaagcttaagaaa
ttgaacggatcagaagttgatgaagcgctgatttacaactacattgttctcatgaggctc
ggattcttcgatggagatccaaaatcgcttccctttggtcatcttggaccgtctgatgtt
tgcagcaaggaccatcaaatgcttgcgctggaagccgcgaagcaggggattgtactactt
gagaacagaggagatcttccattgtcaaagaccgcggttaaaaaacttgcggtcataggt
ccaaacgcaaatgctacaaaggtaatgattagtaactacgcgggtgtgccttgtaagtac
acaagccctttacaagggctgcaaaagtatgtacccgaaaaggttgtttacgagctggga
tgtaacgatgtcaaatgcggtgaccaaacactgatttcagcagcggtcaaggcggtttca
gaggctgatgtgacggttttggtggttggattggatcagacggtagaggcagagggtctt
gaccgggttaacctaacccttccgggttatcaggaaaagctggtgagagatgtggctaat
gcagcaaagaaaacagttgttttggtcataatgtctgctggacctatagatatctccttc
gtcaagaatctgagcaagattagcgcggtattatgggttgggtaccctggtcaagctgga
ggagacgctatagctcaagtcatctttggtgactacaatccttctgggagactaccagag
acatggtactcacaagagtttgcagataaggttgcgatgacagacatgaacatgagacct
aactcaacctccggtttccctggaagatcttacagattctacacagggaatccgatttac
aatttcggatacggacttagctactcttctttctctactttcgttctctcagctccatcg
ttcatacacatcaaaaccaatccaatcttgaaactaaacaagacaacatctgtcgacatc
tccaccgtaaactgccacgatctcaagatccgaatcgttatcggggtcaagaaccacggg
ctacggtctggaagccatgtggtgctcatgttctggaaaccacctaagtgttcaaagtct
ttggtgggtggtggcgtgccacagacgcaactgatagggtttgagagagtagaagttggg
agaagcatgacagagaaagttaccattgagtttgatgtctgcaaagaacttagccttgtg
gatactaacggtaaaaggaaactagtcacagggcaccacacgcttgttatcggttctaac
agtgatcaacaaatctatcatcatctcaacgttagattggcgggagattcaacggtttct
atctaa
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