Camelina sativa (false flax): 104746465
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Entry
104746465 CDS
T05044
Name
(RefSeq) DNA polymerase I B, chloroplastic/mitochondrial isoform X1
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csat
Camelina sativa (false flax)
Pathway
csat03030
DNA replication
csat03410
Base excision repair
csat03420
Nucleotide excision repair
csat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104746465
03410 Base excision repair
104746465
03420 Nucleotide excision repair
104746465
03440 Homologous recombination
104746465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csat03032
]
104746465
03400 DNA repair and recombination proteins [BR:
csat03400
]
104746465
Enzymes [BR:
csat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104746465
DNA replication proteins [BR:
csat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
104746465
DNA repair and recombination proteins [BR:
csat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
104746465
NER (nucleotide excision repair)
GGR (global genome repair) factors
104746465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
104746465
NCBI-ProteinID:
XP_010466250
LinkDB
All DBs
Position
15:11586712..11593490
Genome browser
AA seq
1042 aa
AA seq
DB search
MGVSLRHLSPSSFWVSRRPRVSSSSSILSFLVPRRRIISRKIAIINGNSGYSTATTDCGG
SHGFQHSGHQRSSSVEFSGEWKLNLGSKTARMVPPTVKEAGAVSAWRDEVNNLRGRNGEH
ANNNQDDAFGNGSYYFKGFVPKIDDVQSYGNGQNFDYKLKQGSDITTLDRELNGFMQTNS
IRRPVVALPSKDIEVEGKTDMTLRGDKDAHGKQSDSSLDNASYKKSATVSQVEKCTNLSK
VRANLKKIYERVFVVDDAYTAKKTVAKLMNEYRNLVHACDTEVSRIDVKTETPVDHGEMI
CFSLYCGSEADFGDGKSCIWVDLLGESGRDILAEFKPFFEDSSIKKVWHNYSFDHHIIRN
YGIKLSGFHGDTMHMARLWDSSRRISGGYSLEALTSDPRVLGGTETKEEAELFGKISMKK
IFGKGKLKKDGSEGKLVIVPPVEELQKDDREAWISYSALDSISTLKLYESMKKQLQVKQW
FLDGHLISKKNMFDFYQEYWQPFAELLAKMEAEGILVDRDYLAQIEIVAKAEKEIAVSRF
RNWASKHCPDAKHMNVGSDTQLRQLFFGGITNSCNGEDLPYEKLFKVPNVDKVIEEGKKT
ATKFRNIKLHRISDNPLPTEKFTASGWPSVSGDTLKALAGKVSAEYDYTDGVLDTSLEEN
TGDDDFISLPDEILETQHSNTSDESNTSAYGTAFDGFGGGESGKEACHAIAALCEVCSID
SLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFI
ASPGNSLIVADYGQLELRILAHLTGCKSMMEAFIAGGDFHSRTAMNMYPHIREAVENGEV
LLEWHPQPGQEKPPVPLLKDAFASERRKAKMLNFSIAYGKTAVGLSRDWKVSREEAQETV
NLWYNDRQEVRKWQELRKKEAIKNGYVVTLLGRARKFPVYRSRAQKNHIERAAINTPVQG
SAADVAMCAMLEISTNQCLKELGWKLLLQIHDEVILEGPSESAENAKDIVVKCMSEPFNG
KNILSVDLSVDAKCAQNWYAGK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctcttcgtcacctctctccttcctctttctgggtttcgcgtcgtcctcgt
gtttcttcttcttcttcaattctttcttttcttgtgcctcgccgtagaatcatttccaga
aaaatagctatcatcaatggaaattccggatattccactgctacgactgattgtgggggt
tcccatggatttcagcattcgggtcatcaacggtcgtcctctgttgagtttagtggagag
tggaaacttaatttgggttctaagacggcaagaatggttccgccaactgtgaaagaagct
ggagctgtgagtgcttggagggatgaagtcaataacttgagaggaagaaatggcgaacat
gctaacaacaaccaagatgatgcttttggtaacggaagttattatttcaaaggctttgtc
cctaaaatagatgatgtccaatcttatggaaacggccagaactttgattacaagctgaag
caaggaagtgatattaccacacttgatagagaattgaatggatttatgcaaactaatagt
ataagaagaccggtcgttgcattaccaagcaaggatattgaggttgaggggaaaacagac
atgactctgagaggagataaggatgcacatggaaaacaaagtgattcgtctcttgacaat
gcaagctataagaaatcagcaaccgtttcccaagtggaaaaatgcaccaacctgtcgaaa
gtccgagcaaacctcaagaaaatatatgagagagtttttgttgttgatgatgcgtatact
gcaaagaaaaccgtggctaagctcatgaatgaatataggaatcttgtccatgcttgcgat
acagaggtgtccaggattgatgtgaagactgaaacacctgtggaccatggggagatgata
tgtttcagtttatattgtggatcagaagcagattttggagacggaaaatcatgtatctgg
gtagatttgcttggcgaaagtggaagggatatcttggctgagtttaagccatttttcgaa
gactcatcaataaaaaaagtatggcataactacagctttgatcaccacattatcagaaat
tatggaatcaagctttctggttttcatggtgatacgatgcacatggcacgattgtgggat
tcatcaagacggatatctggtggttattcgctcgaagcacttacaagtgacccaagagtt
cttgggggaactgagacaaaggaggaagcagaattatttggtaaaatatcaatgaagaag
attttcggcaaggggaaactgaaaaaagatggatcagaggggaaattggtgatcgttcct
cctgttgaagagctacaaaaagacgatcgagaagcttggatttcctactcggcgttggat
tcaataagcacactaaagctttatgagagcatgaagaaacaactgcaagtgaagcaatgg
tttcttgatggacatctcatttcaaaaaagaacatgtttgatttctaccaagaatattgg
caaccttttgctgaacttcttgccaaaatggaagcggaaggaattcttgtagatagggat
tatttggcgcagattgagattgtagccaaagcagaaaaagaaattgctgtttcgaggttc
cgaaattgggcttcaaaacattgtccagatgcgaagcatatgaatgttggcagtgacacg
caattgcgacaactcttttttggtggcattactaacagttgtaatggtgaggatcttcca
tatgaaaaacttttcaaagttcctaatgttgataaggtgattgaagaaggaaaaaagaca
gcgacaaagttccggaatatcaaactgcataggattagcgacaatcctctacccactgaa
aagttcactgcctcaggctggccctctgttagtggagacaccttgaaagccttagctggg
aaagtgtctgcagaatatgactatacggatggcgttttagatacttctctagaagaaaac
actggagatgatgattttatttcgctaccagatgaaattttagaaacacaacactccaat
acctctgatgaatcaaacacatctgcttatggaacagcatttgatgggtttggagggggt
gaaagtggaaaggaggcttgccatgctattgccgcactatgtgaagtttgctccattgat
tccttaatatcaaattttattcttcctttgcagggaagtaatgtgtcaggaaaagatggt
cgtgtccactgctccctgaatattaacactgaaactggtcgcttatctgctagaaggcca
aatttgcagaaccaacctgcattggagaaagatcggtacaagatccgtcaggccttcata
gcatcacctggaaattcactgattgttgctgattatggacagcttgaacttagaattcta
gcgcatcttactggttgcaaaagcatgatggaagctttcatagctggtggagacttccac
tcgagaacagccatgaatatgtatccacatattcgtgaagctgttgaaaatggtgaagtg
ctccttgaatggcatccacaacctggacaagagaagccgccagtgccgttattgaaggat
gcctttgcttctgagagaagaaaagcaaagatgcttaacttctcgattgcgtatgggaag
actgctgttggactttctagagattggaaggtttcaagagaagaagctcaagaaacagtt
aatctctggtataatgacaggcaagaagtccgcaaatggcaagaactacgcaagaaagaa
gctataaaaaatgggtatgtagtcactttgttgggaagggctcgtaaattccctgtatac
cgttcacgtgcccagaagaaccatatcgaacgagcagcaatcaacactcctgttcaggga
agcgcagctgatgttgctatgtgcgctatgctggagatatcaacaaatcaatgtctaaaa
gagcttggttggaaattgcttctacaaattcatgatgaagtaattttggaaggacctagt
gagtcagcagagaatgctaaagacatagtagtgaaatgcatgagtgaacccttcaacggc
aagaatattctctcagtcgacttatctgttgatgctaagtgtgctcagaactggtatgct
ggcaagtaa
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