Camelina sativa (false flax): 104746554
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Entry
104746554 CDS
T05044
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
csat
Camelina sativa (false flax)
Pathway
csat03015
mRNA surveillance pathway
csat04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104746554
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
104746554
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csat01009
]
104746554
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csat03019
]
104746554
03036 Chromosome and associated proteins [BR:
csat03036
]
104746554
Protein phosphatases and associated proteins [BR:
csat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
104746554
Messenger RNA biogenesis [BR:
csat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
104746554
Chromosome and associated proteins [BR:
csat03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
104746554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ComGF
Motif
Other DBs
NCBI-GeneID:
104746554
NCBI-ProteinID:
XP_010466359
LinkDB
All DBs
Position
15:12300902..12306207
Genome browser
AA seq
527 aa
AA seq
DB search
MNGGDEVGGSGKLPQPLDWRFSQVFGERSAGEEVQEAGVSSAVDIISAIEFDKSGDHLAT
GDRGGRVVLFERTDSKNASGARRDLEGTDYPLRHPEFRYKTEFQSHEPEFDYLKSLEIEE
KINKIRWSQTANGALFLLSTNDKTIKFWKVQDKKIKKICDINTDSSRTLGNGSAASSSNS
NSTNACLTNGGLPDKVNNSLSNDFSLPPGGIPLLRLPVVTASHETSPVARCRRVYTHAHD
YHINSISNNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPT
HCNTLAYSSSKGSIRLIDLRQSALCDSHSKLFEDTETPSSRSFFTEIIASVSDIKFAKEG
RYILSRDYMTLKLWDINMDSGPVSTFQVHEHLRPKLCDLYENDSIFDKFECCLSGDGLRV
ASGSYSNLFRVFGVSPGSTETTTLEASKNPMRRQVTTPSRPSRSLSSITRAVRRVSKKWE
TGAAESSGVDGNANSFDHTTKLLHLAWHPTENSIACAAANSLYMYYA
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtgatgaggtcggaggttcgggaaagttacctcagcctctggattggaga
ttttctcaggtttttggtgaacgcagcgctggtgaagaagttcaagaagctggtgtttcc
tctgcagttgatataatttctgcgattgagtttgataaatctggtgaccatcttgctact
ggggaccgtggtggacgtgttgttctttttgagagaacagattccaaaaatgccagtgga
gcaagaagagatctggaaggaacagactatccactgaggcacccggagtttcgttataaa
actgaatttcaaagtcatgaacctgagtttgattacctcaagagtttggagatagaagag
aaaatcaacaaaattagatggtctcaaacagcaaatggtgctctttttctcctttcaaca
aatgataaaaccatcaaattttggaaggttcaagataaaaagatcaaaaagatctgtgat
ataaatacagattcttccagaactctaggaaatggaagtgctgcaagctcaagtaactca
aacagtacaaacgcatgcctcactaatggaggattacctgacaaagtaaacaattcttta
agtaatgacttctcattgccgccaggaggcatcccattactgcgattacctgtggtaact
gctagtcatgagactagccctgtggctagatgtcgaagagtatacactcatgcccatgat
tatcatatcaattcaatctcaaacaatagtgacggggagacatttatttctgctgatgat
ttgcgaataaatctttggaacctggagatcagcaaccaaagttttaacattgttgatgtc
aagcctgcaaatatggaagatctaactgaggttataacatcagctgaatttcatcctacc
cattgcaatacgttagcctatagcagttcgaaaggctcaattcgcctgattgatctgcga
caatcagctttatgtgactcacattccaaattgtttgaggacacagagacaccaagttct
agatcatttttcacggagataattgcttcagtttcggatattaaatttgcgaaagaagga
agatatatacttagccgtgactacatgacgcttaagttatgggacatcaacatggactca
ggtccagtatcaactttccaggttcacgaacatttaagaccaaagctctgtgatttgtat
gaaaatgattcaatctttgataagttcgagtgttgtctaagtggggatggattgcgagtg
gcttcaggttcctacagcaatctcttccgagtgtttggtgtttccccgggaagtactgaa
actacaaccttggaagcaagcaaaaatccaatgaggcgacaagtcacaactccctcgagg
ccatcaagatcgctaagcagtataacgcgcgcggttagaagagtttcaaaaaaatgggaa
acaggagcagcagagagttccggagtcgacgggaatgctaattctttcgaccatacaacc
aaattgctgcatctcgcatggcatccaacagaaaactcgatagcttgtgctgcagccaac
agtttgtacatgtactatgcttag
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