KEGG   Camelina sativa (false flax): 104746793
Entry
104746793         CDS       T05044                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 8-like
  KO
K12614  ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
Organism
csat  Camelina sativa (false flax)
Pathway
csat03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    104746793
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csat03019]
    104746793
   03036 Chromosome and associated proteins [BR:csat03036]
    104746793
Enzymes [BR:csat01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     104746793
Messenger RNA biogenesis [BR:csat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     104746793
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     104746793
Chromosome and associated proteins [BR:csat03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    104746793
SSDB
Motif
Pfam: DEAD Helicase_C CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 104746793
NCBI-ProteinID: XP_010466626
LinkDB
Position
2:397482..400569
AA seq 484 aa
MNNRGRYPPGNGAGRGAINPNPNYQSRQGYYQQQPQPQYVQRGGYAQNHHQQAPSQPHQY
QQQQQQQQQWLRRAQIPSGGNSNGDAVVEVEKTVQSEVIDPNSEDWKAKLKLPAPDTRYR
TEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGK
TAAFCIPVLDKIGQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKD
DIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLISFL
PENRQILMFSATFPVTVKAFKDRFLTNPYVINLMDELTLKGVTQFYAFVEERQKIHCLNT
LFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRN
LVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLY
VFLS
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgaacaatcgaggaaggtatcctcccggaaatggcgctggccgtggtgccattaaccct
aaccctaattaccaatcacggcagggctattatcaacagcaaccacagccacaatacgtt
cagcgcggtggttacgctcagaatcaccaccaacaagcgccgtctcagccacatcaatac
caacaacagcaacagcaacaacaacaatggcttcgacgagctcagatcccctccggcggt
aacagtaacggtgatgcagttgtagaagttgagaaaactgttcagtccgaagttatcgac
ccaaattcagaagattggaaggctaagctaaaactacccgcacctgatactcgctacaga
acagaggatgtgacagccaccaaagggaacgagtttgaagattattttttgaaacgggag
cttctcatggggatttatgagaagggttttgaaagaccttctcctattcaggaagagagt
attccaattgccttaactggtagagatatccttgccagagcaaagaacgggactgggaag
actgccgccttttgtattcctgtcttggataaaattggccaagataacaacgttattcaa
gctgttataattgttccaactcgagaattagcccttcagacatcacaagtgtgtaaggag
ctgggtaagcatttgaagattcaagtcatggtgaccacagggggaaccagtctgaaagac
gatattatgcgtttgtatcagcctgtccatttactggtaggaactcctggcagaattctt
gatcttaccaagaaaggtgtttgtgttttgaaagattgttcggtgctcgttatggatgag
gctgataagcttttgtctcaagagttccaaccttcagtggaacatttgattagctttctt
ccggaaaatcgacagatattgatgttctcagccacgtttcctgtcactgtcaaggctttt
aaggatagatttctgacgaatccttacgtcatcaatctcatggatgaacttacgctcaag
ggtgttacccaattctatgcattcgtagaagagagacagaagattcattgcttgaataca
ctattctccaagctgcaaattaaccaatcaatcatattctgtaattctgtaaaccgtgtg
gagctcttagctaaaaaaatcacagaacttgggtattcgtgcttttacattcatgcaaag
atgcttcaagaccaccggaacagagtgttccatgattttcgcaacggtgcatgccggaat
ctcgtgtgtactgacttgttcacacgtgggattgacattcaagcagtcaatgtggtgata
aactttgatttccccaaaaatgcagaaacttatctccatagggttggtcgatcaggaagg
tttggccatcttggtttagctgtgaatcttatcacctatgaggaccgatttaacctgtat
gtctttctctcttga

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