Camelina sativa (false flax): 104746812
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Entry
104746812 CDS
T05044
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like
KO
K12819
pre-mRNA-processing factor SLU7
Organism
csat
Camelina sativa (false flax)
Pathway
csat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104746812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csat03041
]
104746812
Spliceosome [BR:
csat03041
]
Complex C
Other components
Step II factors
104746812
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
Tudor_3
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
104746812
NCBI-ProteinID:
XP_010466643
LinkDB
All DBs
Position
15:14963575..14966450
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AA seq
538 aa
AA seq
DB search
MATASVGFKSREEHRKKQELEEARKAGLAPAEIDEEGKVINPHIPQYMSSAPWYLNAEKP
SLKHQRNWKSDPNYTKSWYDRGVRTFKADKYRKGACENCGAMTHSTKLCIERPRKIGAKW
TNKHISPDEKIESFKLDYDGKRDRWNGYDMNQYARVIERYEARDEARRKFLKEQQLKKLE
EKSKKQRVDEDCSDVDDEEEDALKLDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLR
IREDTAKYLLNLDVNSAYYDPKTRSMREDPLPNADPYEKFYSGDNQYRMTGQALDFKKLN
VHAWESFEKGQAEISMQAAPSQAELLFKNYKAAKEKLKKQMKETILEKYGNAASEEEIPR
ELLLGQSEREVEYDRCGRVIKGMESSVPKSKYEEDVYINNHTSVWGSWWKDHQWGYKCCQ
QTIKNSYCTGVAGIEAAKETADLMKTNIERKTNSYETSGTVTEKRLATWGSETQEGLVLD
QNKLAEALKKEDERKREEKDERKRKYNVQWNDQVTPEEMEAYRMKRMHQDDPMKNLLH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcatcagttgggtttaagtcaagagaagagcatcgaaagaagcaagaattg
gaggaagcgcgtaaagctgggcttgctccagctgagattgatgaggaaggtaaagtgatt
aaccctcacatacctcagtacatgtcatctgctccgtggtatcttaatgctgagaaacct
agcttgaaacatcagaggaattggaaatctgatcctaactatacgaagtcgtggtatgat
agaggagtgagaacgttcaaggcagacaagtataggaaaggagcttgtgaaaactgtggg
gctatgacacatagcacaaaattgtgtattgagaggccaaggaagataggagcaaagtgg
actaataagcatatatcccctgatgaaaagattgagtcttttaaacttgattatgatggg
aaaagggatagatggaacggttacgatatgaatcaatatgctcgagtaattgagaggtat
gaggctagggatgaagcgagaaggaagttcttgaaagagcagcaactgaaaaagttggaa
gagaagagtaaaaagcagcgtgtggatgaagattgtagtgatgttgatgatgaagaagaa
gatgctctgaaacttgatgaagccaaagttgatgagagcaagcaaatggactttgctaaa
gtagagaaacgtgtcagaacaacaggtggtggcagcacaggaactgttaggaatttgcgt
atacgtgaagacactgcaaaatatcttctgaatcttgatgtcaattctgcttattacgat
cccaaaacccggtctatgcgtgaagatcctcttccaaatgccgatccatatgaaaagttc
tattcaggagacaatcaatacagaatgactggtcaagccctagacttcaagaagctcaat
gttcacgcgtgggaatcatttgagaaaggccaagcggagatcagcatgcaagctgctcct
tctcaagctgagctgttattcaagaattataaagcagcaaaggaaaaactgaagaaacag
atgaaagaaaccattttggagaaatatggaaatgctgcatctgaggaagaaatcccaagg
gagcttttactaggacaaagcgagagagaagtcgaatatgaccgttgtggaagagttatc
aaaggaatggaatcatcggtacctaaaagcaaatatgaggaagatgtttatataaacaac
cacacaagtgtatggggttcgtggtggaaagatcaccaatggggatacaaatgttgtcag
caaacgatcaagaacagctattgtactggagttgcaggaatcgaggcggctaaggaaact
gcagatctgatgaaaaccaatatcgaaagaaaaacaaattcttatgagacgtccggtaca
gtaacagagaaaagactcgcgacttggggaagtgaaacgcaagaaggtctggttcttgac
cagaacaaactcgcggaagctctaaagaaggaggatgagagaaagagagaggagaaagat
gaaagaaaacgcaaatacaacgtccaatggaatgatcaggttacacctgaagagatggaa
gcatatagaatgaaaagaatgcatcaggatgatcccatgaagaatcttttgcactaa
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